Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0189
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001463-1|AAN71218.1|  167|Drosophila melanogaster GM23292p pro...    43   3e-04
AE014134-2629|AAF53480.1|  167|Drosophila melanogaster CG13240-P...    43   3e-04
BT023709-1|AAY85109.1|  138|Drosophila melanogaster HL02152p pro...    42   5e-04
AE014134-2630|AAN10909.1|  138|Drosophila melanogaster CG13240-P...    42   5e-04

>BT001463-1|AAN71218.1|  167|Drosophila melanogaster GM23292p
           protein.
          Length = 167

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +2

Query: 245 PNAGEQRAAHYRYISGKLGLIAXAMLSTPYYFKYLRNDWTKXGG 376
           P  G QRA   R+ +GK  L    + +  YYFKY +NDWT+ GG
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNDWTRKGG 126



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 23/45 (51%), Positives = 26/45 (57%)
 Frame = +3

Query: 120 WLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLXAKLTPML 254
           WLKDQ L  H P  V     E  NPI+RFYR PLD +   L P+L
Sbjct: 42  WLKDQELH-HGPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVL 85



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 67  ERERCLGMTDAERAWR 114
           ERER +GM+  ERAWR
Sbjct: 24  ERERLIGMSPEERAWR 39


>AE014134-2629|AAF53480.1|  167|Drosophila melanogaster CG13240-PA,
           isoform A protein.
          Length = 167

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +2

Query: 245 PNAGEQRAAHYRYISGKLGLIAXAMLSTPYYFKYLRNDWTKXGG 376
           P  G QRA   R+ +GK  L    + +  YYFKY +NDWT+ GG
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNDWTRKGG 126



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 23/45 (51%), Positives = 26/45 (57%)
 Frame = +3

Query: 120 WLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLXAKLTPML 254
           WLKDQ L  H P  V     E  NPI+RFYR PLD +   L P+L
Sbjct: 42  WLKDQELH-HGPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVL 85



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 67  ERERCLGMTDAERAWR 114
           ERER +GM+  ERAWR
Sbjct: 24  ERERLIGMSPEERAWR 39


>BT023709-1|AAY85109.1|  138|Drosophila melanogaster HL02152p
           protein.
          Length = 138

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 23/45 (51%), Positives = 26/45 (57%)
 Frame = +3

Query: 120 WLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLXAKLTPML 254
           WLKDQ L  H P  V     E  NPI+RFYR PLD +   L P+L
Sbjct: 42  WLKDQELH-HGPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVL 85



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 245 PNAGEQRAAHYRYISGKLGLIAXAMLSTPYYFKYLRN--DWTKXGGGKY*K 391
           P  G QRA   R+ +GK  L    + +  YYFKY +N  +W++   G Y K
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNVSNWSRIQVGYYYK 133



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 67  ERERCLGMTDAERAWR 114
           ERER +GM+  ERAWR
Sbjct: 24  ERERLIGMSPEERAWR 39


>AE014134-2630|AAN10909.1|  138|Drosophila melanogaster CG13240-PB,
           isoform B protein.
          Length = 138

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 23/45 (51%), Positives = 26/45 (57%)
 Frame = +3

Query: 120 WLKDQVLAAHEPVHVEEYWRERTNPIRRFYRKPLDVLXAKLTPML 254
           WLKDQ L  H P  V     E  NPI+RFYR PLD +   L P+L
Sbjct: 42  WLKDQELH-HGPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVL 85



 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 245 PNAGEQRAAHYRYISGKLGLIAXAMLSTPYYFKYLRN--DWTKXGGGKY*K 391
           P  G QRA   R+ +GK  L    + +  YYFKY +N  +W++   G Y K
Sbjct: 83  PVLGFQRAYTVRFWTGKALLALTGIYAGAYYFKYNQNVSNWSRIQVGYYYK 133



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 67  ERERCLGMTDAERAWR 114
           ERER +GM+  ERAWR
Sbjct: 24  ERERLIGMSPEERAWR 39


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,088,210
Number of Sequences: 53049
Number of extensions: 422918
Number of successful extensions: 750
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)