Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0186
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   5.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.4  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 301 RWTDECXTAXNFAFRWRDMVAPHRHTGVV 387
           R  D+   + +   RWRD +    H+GVV
Sbjct: 296 REVDQIRLSLDDMDRWRDRIYDAIHSGVV 324


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 244 YFPLCTDLWECRYXQLLRTFRKRXVSLQAS 155
           +F +C D        ++  FRKR V+ + S
Sbjct: 77  FFAICCDFIALIVVNIVHVFRKRRVNYKDS 106


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 241 SRGFASXGFSSVVTLKKPWTRWTDE 315
           ++G+   GF+ +      WTR  D+
Sbjct: 288 TKGYGVMGFNEICEFTGDWTRVFDD 312


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 20  NLTTLYYSICLI 55
           NLT + YS+C+I
Sbjct: 173 NLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 20  NLTTLYYSICLI 55
           NLT + YS+C+I
Sbjct: 173 NLTLITYSLCVI 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,688
Number of Sequences: 336
Number of extensions: 1549
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)