Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0186
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 36 0.022
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 36 0.029
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 35 0.050
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.067
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.067
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 33 0.12
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 33 0.15
SB_31354| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.36
SB_2108| Best HMM Match : DUF702 (HMM E-Value=4.7) 32 0.36
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 30 1.4
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 1.9
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 29 1.9
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 29 2.5
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 29 3.3
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 29 3.3
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21) 28 4.4
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 28 4.4
SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022) 28 4.4
SB_25623| Best HMM Match : THAP (HMM E-Value=0.00058) 28 4.4
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 27 7.6
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 105 bits (251), Expect = 3e-23
Identities = 51/91 (56%), Positives = 58/91 (63%)
Frame = +1
Query: 94 RPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFSS 273
R PP IDGM S KV NLTYRTT EDL++VF++ G++GDIYIPRDR T ESRGFA F
Sbjct: 7 RGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYE 66
Query: 274 VVTLKKPWTRWTDECXTAXNFAFRWRDMVAP 366
+ C A F FRWRDMV P
Sbjct: 67 KRDAEDAMDCMDATCLMAEKFVFRWRDMVVP 97
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V NL Y T DL +VFER G+V + I RD+ TRESRG A
Sbjct: 14 VGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVA 54
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFSSVVTLKK 291
V NL+Y TT + L FE C I+ DR + ESRGF + V T KK
Sbjct: 293 VRNLSYDTTTDSLGAAFEGCSNAKVIF---DRESGESRGFGFVDYDDVETAKK 342
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFS 270
V L TT E LR FE GE+ D+ + D T++SRGF F+
Sbjct: 18 VGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFA 63
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 35.9 bits (79), Expect = 0.022
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 151 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
R ED+R FE+ G + D+++ +D+ T+E+RG
Sbjct: 33 RHNAEDIRSAFEQYGTIEDVWVVKDKATKENRG 65
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 35.5 bits (78), Expect = 0.029
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGF 267
V L+Y TT E L+ F + GE+ + I D T RGFA F
Sbjct: 33 VGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQF 77
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 34.7 bits (76), Expect = 0.050
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 112 DGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFSS 273
D S + NL + E LR +F CG V + + RDR T +GF F S
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFES 106
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 34.3 bits (75), Expect = 0.067
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGF 267
V L Y TT +++ F R GE+ + D TR SRGF F
Sbjct: 119 VLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRF 163
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 73 LLKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIPR 222
L ++ RP ++ V L TT + L F + GEV D+YIP+
Sbjct: 183 LCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPK 232
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 34.3 bits (75), Expect = 0.067
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 160 PEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFS 270
P DL F + G+V D+ I DR +R S+G A F+
Sbjct: 159 PRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFT 195
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 73 LLKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 252
+L + YG + V LT + + E LR+ FE+ GE+ + + RD T+ SRGF
Sbjct: 95 ILDIDYGTS--HFSSTLELSVIPLT-QASAEGLRQHFEKFGELKECVVMRDPVTKRSRGF 151
Query: 253 ASXGF 267
F
Sbjct: 152 GFLTF 156
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGF 267
EDLR FE G++ + I RD TRE++G+ F
Sbjct: 67 EDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKF 101
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFSSVVT 282
V + Y + + LR+ F + GE+ + + +DR T++S+G+ GF ++ T
Sbjct: 14 VGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGY---GFVTMAT 60
>SB_31354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2286
Score = 31.9 bits (69), Expect = 0.36
Identities = 27/95 (28%), Positives = 40/95 (42%)
Frame = +1
Query: 40 FNLFDLS*ISILLKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIP 219
F+L DL + + L + R P IDG S ++ +T + G V +Y+
Sbjct: 98 FSLEDLFPVRLDLTAA-NRSPIAIDGAFSARLSTITRDGEAVSCSSMVYVSGSVQAMYLS 156
Query: 220 RDRYTRESRGFASXGFSSVVTLKKPWTRWTDECXT 324
+ +RG S GF S LK P TD+ T
Sbjct: 157 YESML--NRGILSHGFPSAEPLKNPSDEHTDDSAT 189
>SB_2108| Best HMM Match : DUF702 (HMM E-Value=4.7)
Length = 297
Score = 31.9 bits (69), Expect = 0.36
Identities = 27/95 (28%), Positives = 40/95 (42%)
Frame = +1
Query: 40 FNLFDLS*ISILLKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIP 219
F+L DL + + L + R P IDG ++ +T R + G V +Y+
Sbjct: 152 FSLEDLFPVRLDLTAA-NRSPIAIDGAFFARLSTITRDGEAVSCRSMVYVSGSVQAMYLS 210
Query: 220 RDRYTRESRGFASXGFSSVVTLKKPWTRWTDECXT 324
+ +RG S GF S LK P TD+ T
Sbjct: 211 YESML--NRGILSHGFPSAEPLKNPSDEHTDDSAT 243
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 181 FERCGEVGDIYIPRDRYTRESRGFASXGFSSV 276
F GE+ +YIP + T+E +G F+SV
Sbjct: 141 FSSSGEIASVYIPENLKTKERKGHCIVTFASV 172
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 456 GCGYDCASNYDAGNETWTCACDRNDSC 376
GCGY C NY GN CD N C
Sbjct: 174 GCGYGCDGNYGCGN-----GCDGNYGC 195
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Frame = -3
Query: 456 GCGYDCASNYDA-----GNETWTCACDRNDSC 376
GCGY C NY GN + CD N C
Sbjct: 134 GCGYGCDGNYGCGYGCDGNYGYGYGCDGNYGC 165
>SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 157 TPEDLRRVFERCGEVGDI-YIPRDR 228
T E+L +FE CG+V D ++P+DR
Sbjct: 161 TEEELTSMFEDCGDVADFRFLPKDR 185
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 76 LKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCG 195
+K+S+ R P+I S V T TTPE+LR++ E G
Sbjct: 1522 MKLSF-RTGPQIGRTKSGFVATYTSGTTPEELRKISENAG 1560
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 255
V +LT + ++ +F G V + +P DR SRGFA
Sbjct: 1161 VAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFA 1201
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDI 210
V +L + TT ++LR FE+CGE+ I
Sbjct: 240 VQDLDFDTTVDELREYFEKCGELTGI 265
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 249
V NL+ T D+ R F G+V ++I DR T +S+G
Sbjct: 323 VDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKG 361
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 29.1 bits (62), Expect = 2.5
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Frame = +1
Query: 88 YGRPPPRIDGMV----SXKVXNLTY-----RTTPED-LRRVFERCGEVGDIYIPRDRYTR 237
YG PPP +G S KV + + R ED L VFE CG + D + D +
Sbjct: 131 YGGPPPGWEGKPPGTGSEKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISG 190
Query: 238 ESRGFASXGFSS 273
++GFA FS+
Sbjct: 191 LTKGFAFCTFSN 202
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 240
V L+ TT DLR VFE+ G V I I D +E
Sbjct: 185 VFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQAKE 220
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/95 (27%), Positives = 39/95 (41%)
Frame = +1
Query: 40 FNLFDLS*ISILLKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIP 219
F+L DL + + L + R P IDG ++ +T R + G V +Y+
Sbjct: 409 FSLEDLFPVRLDLTAA-NRSPIAIDGAFFARLSTITRDGEAVPCRSMVYVSGSVQAMYLS 467
Query: 220 RDRYTRESRGFASXGFSSVVTLKKPWTRWTDECXT 324
+ + G S GF S LK P TD+ T
Sbjct: 468 YESML--NLGILSHGFPSAEPLKNPSDEHTDDLAT 500
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGF 267
V L TT EDL +F R G + + RD+ T ES +A F
Sbjct: 124 VCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEF 168
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/95 (27%), Positives = 39/95 (41%)
Frame = +1
Query: 40 FNLFDLS*ISILLKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIP 219
F+L DL + + L + R P IDG ++ +T R + G V +Y+
Sbjct: 162 FSLEDLFPVRLDLTAA-NRSPIAIDGAFFARLSTITRDGEAVSCRSMVYVSGSVQAMYLS 220
Query: 220 RDRYTRESRGFASXGFSSVVTLKKPWTRWTDECXT 324
+ + G S GF S LK P TD+ T
Sbjct: 221 YESML--NLGILSHGFFSAEPLKNPSDEHTDDSAT 253
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 142 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFSS 273
L + + L++VF G+V + +PR ++ E +GFA F S
Sbjct: 95 LPFHADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFES 138
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFSS 273
ED++++F G V + RDR T +S G+A + +
Sbjct: 41 EDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDN 77
>SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21)
Length = 1405
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/77 (27%), Positives = 30/77 (38%)
Frame = +1
Query: 94 RPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFASXGFSS 273
R P IDG ++ +T R + G V +Y+ + + G S GF S
Sbjct: 385 RSPIAIDGAFFARLLTITRDGEAVSCRSMLYVSGSVQAMYLSYESML--NLGILSHGFPS 442
Query: 274 VVTLKKPWTRWTDECXT 324
LK P TD+ T
Sbjct: 443 AEPLKNPTDEHTDDSVT 459
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 133 VXNLTYRTTPEDLRRVFERCGEVGDIYIPR 222
V N+ TT DL+ FER GEV D+ I +
Sbjct: 253 VGNIEKTTTYGDLKEAFERYGEVIDVDIKK 282
>SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022)
Length = 1012
Score = 28.3 bits (60), Expect = 4.4
Identities = 26/95 (27%), Positives = 39/95 (41%)
Frame = +1
Query: 40 FNLFDLS*ISILLKMSYGRPPPRIDGMVSXKVXNLTYRTTPEDLRRVFERCGEVGDIYIP 219
F+L DL + + L + R P IDG ++ +T R + G V +Y+
Sbjct: 119 FSLEDLFPVRLDLTAA-NRSPIAIDGAFFARLSTITRDGEAVSCRSMVCISGSVQAMYLS 177
Query: 220 RDRYTRESRGFASXGFSSVVTLKKPWTRWTDECXT 324
+ + G S GF S LK P TD+ T
Sbjct: 178 YESML--NLGILSHGFPSAEPLKNPSDEHTDDSAT 210
>SB_25623| Best HMM Match : THAP (HMM E-Value=0.00058)
Length = 538
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 547 DIQCLDLERERLCSGTSLELFESDES 470
D+ LD + C TS E F+SDE+
Sbjct: 159 DVSGLDAHSDEACGSTSYEYFDSDET 184
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +1
Query: 163 EDLRRVFERCGEVGDIYIPRDRYTRESR 246
+DLR +FE G++ ++ I +D+YT + +
Sbjct: 184 KDLRPIFEPYGQIYELTILKDKYTGQHK 211
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = -3
Query: 405 TCACDRNDSCMAMRGDHIAPSEREVXCGXTFVXPSCPGLLQRHDARKTSRXESSTFPCVP 226
TC C +++C+A RG+ + S + T+ S R + S+ S T
Sbjct: 1110 TCDCGEDETCVACRGEKHSDSTHALEDYTTYSIASSSRRFSRGSSENLSKSASVTSSTES 1169
Query: 225 IS 220
IS
Sbjct: 1170 IS 1171
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,982,988
Number of Sequences: 59808
Number of extensions: 213853
Number of successful extensions: 582
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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