Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0185
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    30   0.015
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.4  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   9.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 0.015
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
 Frame = -3

Query: 465 CANGC-GYDCXSNYDGGNEXWTCACDRNDSCMXMRGDHIAPSEREVPCRPTFVRPSCPGL 289
           C +G  GY C  N D        AC  N +C+   G        E  C P FV P C G 
Sbjct: 248 CPSGTLGYICEINVDDCRPG---ACHNNGTCLDKVGGF------ECKCPPGFVGPRCEGD 298

Query: 288 LQRHDARKTSRSESSTFPCVPI 223
           +  ++      S + T  CV +
Sbjct: 299 I--NECLSNPCSNAGTLDCVQL 318


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 343 RWRDMVAPHRHTGVV 387
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -2

Query: 259 TKRILYFPLCTDLWECRYHQLLRTFRKRGVSLQAS 155
           T    +F +C D        ++  FRKR V+ + S
Sbjct: 72  THIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDS 106


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/34 (29%), Positives = 12/34 (35%)
 Frame = -3

Query: 534 GS*ARKLCDGNVPWNSLSQSESDCANGCGYDCXS 433
           G    KLC   + +N  S     C      DC S
Sbjct: 61  GQITEKLCPDGMVFNDYSSEYEKCDLPFNIDCTS 94


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = -1

Query: 317 HSSVHRVQGFFSVTTLEKPHEANP 246
           HS   R  G F    +  P E NP
Sbjct: 180 HSGFQRSDGTFGPFIVRVPEEDNP 203


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +2

Query: 167 TYAAFSKGAEKLVISTFPEIGTQGKVEDSLREVFR 271
           +Y   +     L +   PE+G   +++  LR V+R
Sbjct: 92  SYNTLNTCRSALALLLSPEVGKDHRIKRFLRGVYR 126


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 20  NLTTLYYSICLI 55
           NLT + YS+C+I
Sbjct: 173 NLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 20  NLTTLYYSICLI 55
           NLT + YS+C+I
Sbjct: 173 NLTLITYSLCVI 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,843
Number of Sequences: 336
Number of extensions: 2158
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)