Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0183
(379 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 103 6e-23
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 95 1e-20
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 90 4e-19
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 90 4e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 88 2e-18
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 87 5e-18
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 69 8e-13
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 69 8e-13
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 43 8e-05
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 43 8e-05
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 42 1e-04
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 41 3e-04
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 41 3e-04
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 40 6e-04
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 39 0.001
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 39 0.001
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 39 0.001
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 39 0.001
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 38 0.002
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 38 0.002
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 37 0.004
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 32 0.16
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 28 1.9
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 28 1.9
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 103 bits (246), Expect = 6e-23
Identities = 47/57 (82%), Positives = 49/57 (85%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MREIVHIQAGQ GNQIGAKFWE+ S HGI PT AY+GDS LQLERINVYYN ASGG
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGG 57
Score = 35.9 bits (79), Expect = 0.010
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 298 SGXXEPIXRPDXXVFGQXGTGNKWAQG 378
+G + RPD VFGQ G GN WA+G
Sbjct: 78 AGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 95.1 bits (226), Expect = 1e-20
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MREIVH+QAGQ GNQIGAKFWE+ S HGI P Y G+S LQLERINVYYN A+GG
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGG 57
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 298 SGXXEPIXRPDXXVFGQXGTGNKWAQG 378
SG + RPD VFGQ G GN WA+G
Sbjct: 78 SGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 90.2 bits (214), Expect = 4e-19
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGA 227
MREIVHIQAGQ GNQIG+KFWE+ S HGI P+ Y GDS LQLERINVYYN A
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +1
Query: 223 EPPADXYXTPRXLVGLGXRHHSLXSSGXXEPIXRPDXXVFGQXGTGNKWAQG 378
E ++ Y LV L SG + RPD VFGQ G GN WA+G
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG 104
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 90.2 bits (214), Expect = 4e-19
Identities = 41/54 (75%), Positives = 44/54 (81%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGA 227
MREIVHIQAGQ GNQIG+KFWE+ S HGI P+ Y GDS LQLERINVYYN A
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +1
Query: 223 EPPADXYXTPRXLVGLGXRHHSLXSSGXXEPIXRPDXXVFGQXGTGNKWAQG 378
E ++ Y LV L SG + RPD VFGQ G GN WA+G
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG 104
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 87.8 bits (208), Expect = 2e-18
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MREIVH+QAGQ GNQIG+KFWE+ S HGI P + G+S LQLERI+VYYN A+ G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNG 57
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 298 SGXXEPIXRPDXXVFGQXGTGNKWAQG 378
SG + RPD VFGQ G GN WA+G
Sbjct: 78 SGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 86.6 bits (205), Expect = 5e-18
Identities = 37/57 (64%), Positives = 45/57 (78%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MREIVH+QAGQ GNQIG+KFWE+ S HGI P + G++ LQLERI+VYYN A+ G
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNG 57
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 298 SGXXEPIXRPDXXVFGQXGTGNKWAQG 378
SG + RPD VFGQ G GN WA+G
Sbjct: 78 SGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 69.3 bits (162), Expect = 8e-13
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASG 233
M+EI+++Q GQ GNQIGAKFWE S HG+ Y GD+ QLERI YY G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 205 SMYTTMEPPADXYXTPRXLVGLGXRHHSLXSSGXXEPIXRPDXXVFGQXGTGNKWAQG 378
S Y ME Y LV L + S + P+ V G+ G GN W++G
Sbjct: 49 SYYKEME--GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 69.3 bits (162), Expect = 8e-13
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASG 233
M+EI+++Q GQ GNQIGAKFWE S HG+ Y GD+ QLERI YY G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 205 SMYTTMEPPADXYXTPRXLVGLGXRHHSLXSSGXXEPIXRPDXXVFGQXGTGNKWAQG 378
S Y ME Y LV L + S + P+ V G+ G GN W++G
Sbjct: 49 SYYKEME--GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 42.7 bits (96), Expect = 8e-05
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MRE++ I GQ G QIG WE+ HGI P D E +++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNG 57
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 42.7 bits (96), Expect = 8e-05
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MRE++ I GQ G QIG WE+ HGI P D E +++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNG 57
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 69 REIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXL---QLERINVYYNGASGG 236
RE++ I GQ G QIG WE+ HGI P YH + + E IN ++ +GG
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQP-DGYHVEDDTYDEETETINTFFAETAGG 65
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MRE++ I GQ G QIG WE+ HGI P S + E +++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSG 57
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLERINVYYNGASGG 236
MRE++ I GQ G QIG WE+ HGI P S + E +++ G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSG 57
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 39.9 bits (89), Expect = 6e-04
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQLE--RINVYYNGASGG 236
MREIV I GQ G QIG WE+ HGI P D+ +E N +++ G
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSG 59
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXL 191
MRE++ I GQ G QIG WE+ HGI P D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 60 NKMREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXLQL--ERINVYYNGASG 233
N+ RE++ I GQ G Q+G WE+ HGI P + + L + + N +++
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 234 G 236
G
Sbjct: 64 G 64
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXL 191
MRE++ I GQ G QIG WE+ HGI P D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXL 191
MRE++ I GQ G QIG WE+ HGI P D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXP 161
MRE++ I GQ G QIG WE+ HGI P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILP 32
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXP 161
MRE++ I GQ G QIG WE+ HGI P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQP 32
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +3
Query: 66 MREIVHIQAGQXGNQIGAKFWEIXSXXHGIXP 161
MRE++ I GQ G QIG WE+ HGI P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQP 32
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 37.1 bits (82), Expect = 0.004
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 69 REIVHIQAGQXGNQIGAKFWEIXSXXHGIXPTXAYHGDSXL 191
RE++ I GQ G QIG WE+ HGI P D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 31.9 bits (69), Expect = 0.16
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 69 REIVHIQAGQXGNQIGAKFWEIXSXXHGI 155
RE V I GQ G QIG WE+ HG+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGL 34
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 75 IVHIQAGQXGNQIGAKFWEIXSXXHGI 155
++ + GQ GNQ+ FW+ HGI
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGI 33
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 75 IVHIQAGQXGNQIGAKFWEIXSXXHGI 155
++ + GQ GNQ+ FW+ HGI
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGI 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,577,291
Number of Sequences: 27780
Number of extensions: 90549
Number of successful extensions: 119
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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