Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0180
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1D2F5 Cluster: Putative lipoprotein; n=1; Myxococcus x...    35   0.88 
UniRef50_A6CR92 Cluster: Adaptor protein; n=1; Bacillus sp. SG-1...    33   2.7  
UniRef50_Q6IR95 Cluster: MGC80043 protein; n=1; Xenopus laevis|R...    33   4.7  
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol...    33   4.7  
UniRef50_O25792 Cluster: Pyrimidine nucleoside transport protein...    33   4.7  
UniRef50_A6QNT4 Cluster: FAM120B protein; n=3; Laurasiatheria|Re...    33   4.7  
UniRef50_Q822Y4 Cluster: Probable O-sialoglycoprotein endopeptid...    33   4.7  
UniRef50_O00159 Cluster: Myosin-Ic; n=144; root|Rep: Myosin-Ic -...    32   6.2  
UniRef50_Q4XLD0 Cluster: CIR protein, putative; n=2; Plasmodium ...    32   8.2  

>UniRef50_Q1D2F5 Cluster: Putative lipoprotein; n=1; Myxococcus
           xanthus DK 1622|Rep: Putative lipoprotein - Myxococcus
           xanthus (strain DK 1622)
          Length = 558

 Score = 35.1 bits (77), Expect = 0.88
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 94  LVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHY-TCHRY-RCEIRDGKYFIAAVDVEN 267
           +V PAL+A      +CV+ Y   G   W  WS+ + TC  Y   E+ DG  F+ AV VE+
Sbjct: 72  VVSPALAAS----LSCVETYVNAGTCDWAHWSEMWETCETYEHPELEDG-VFLEAVQVED 126


>UniRef50_A6CR92 Cluster: Adaptor protein; n=1; Bacillus sp.
           SG-1|Rep: Adaptor protein - Bacillus sp. SG-1
          Length = 184

 Score = 33.5 bits (73), Expect = 2.7
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +1

Query: 100 LPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYR 279
           L  LS+  V +   +D+   KG     +W D    H +  E+ D  Y    +D+E+    
Sbjct: 3   LERLSSNTVKFSISIDELETKGILKDDQWRDSLVWHEFFEELMDEMYSEYGIDLESTV-- 60

Query: 280 KTHWNATNTSKM 315
               N+ N+S+M
Sbjct: 61  TVEINSVNSSEM 72


>UniRef50_Q6IR95 Cluster: MGC80043 protein; n=1; Xenopus laevis|Rep:
           MGC80043 protein - Xenopus laevis (African clawed frog)
          Length = 513

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +3

Query: 222 DQRREILHSCCGCRKPKIPENALEC-HEYIEDENVEFPTCCARLRCVVEVNGERIVQTRG 398
           D  +++LH+      P IPE AL C    ++ E V+      R+RC +  + E I +TR 
Sbjct: 43  DDHQQLLHTFSYFPYPSIPEIALLCMRNGLQMEKVKSWFMVQRIRCGISWSSEEIEETRS 102

Query: 399 Q 401
           +
Sbjct: 103 R 103


>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
           genome shotgun sequence; n=3; Tetraodontidae|Rep:
           Chromosome undetermined SCAF13769, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 556

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 388 KPEGSLANCSPINHGRGQQNEPNP 459
           +P   +  C  I H R QQNEPNP
Sbjct: 489 RPSADVGKCRMIRHERDQQNEPNP 512


>UniRef50_O25792 Cluster: Pyrimidine nucleoside transport protein;
           n=31; Bacteria|Rep: Pyrimidine nucleoside transport
           protein - Helicobacter pylori (Campylobacter pylori)
          Length = 418

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3

Query: 470 PTTAGFGSFCWPLPWFIGEQFARLPSGLHYSLSIYFDDATQSRTA 336
           P  AG+ S   PLP+ I   F   P GL ++  IY  + T S  A
Sbjct: 188 PVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHA 232


>UniRef50_A6QNT4 Cluster: FAM120B protein; n=3; Laurasiatheria|Rep:
           FAM120B protein - Bos taurus (Bovine)
          Length = 700

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 427 GLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNS 323
           GL G  +  CP VCT+++ F    +R+R+QH G +
Sbjct: 5   GLHGFVASSCPHVCTVVN-FKELAERHRSQHPGGT 38


>UniRef50_Q822Y4 Cluster: Probable O-sialoglycoprotein
           endopeptidase; n=7; Chlamydiaceae|Rep: Probable
           O-sialoglycoprotein endopeptidase - Chlamydophila caviae
          Length = 344

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +3

Query: 255 GCRKPKIPENALECH---EYIEDENVEFP 332
           GC+KP I  N +E H    Y+E ENVEFP
Sbjct: 100 GCQKPIIGVNHVEAHLYAAYMEAENVEFP 128


>UniRef50_O00159 Cluster: Myosin-Ic; n=144; root|Rep: Myosin-Ic -
           Homo sapiens (Human)
          Length = 1028

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 97  VLPALSAEDVSYQACVDKYSRKGYQP 174
           VL AL +E + Y   V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900


>UniRef50_Q4XLD0 Cluster: CIR protein, putative; n=2; Plasmodium
           chabaudi|Rep: CIR protein, putative - Plasmodium
           chabaudi
          Length = 310

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
 Frame = +1

Query: 37  GVLRIQHGKQLGALFMLCCLVLPALSAEDVSYQA--CVDKYSRKGYQPWQEWSDHYTCHR 210
           G+++I +   L  L+ L   +  A++  D    A  C+ KY+ K    +QE++   T  R
Sbjct: 122 GMMKI-YFSYLNKLYALLKGICDAINKCDYPSNADECI-KYANKCANLYQEYAK--TGPR 177

Query: 211 YRCEIRDGKYFIAAVDVENQKYRKTHWNATNTSKMRMSNSPRAVRD-CVASSK*MERE*C 387
           Y          ++ +  +  K+R+T+ N  +  ++++ +   +    C +  + +  E  
Sbjct: 178 YHEYCNPYCNVLSNLKSDYDKFRETNNNKNDLPELKLLDGGESCESFCKSKRQKLNAEKA 237

Query: 388 KPEGSLANCSPINHGRGQQNEPNPAVVGMS 477
           KPE S    SP N   GQ ++  P   G S
Sbjct: 238 KPEDSKIVTSPTNSLSGQPSDILPGNQGYS 267


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,557,858
Number of Sequences: 1657284
Number of extensions: 11740487
Number of successful extensions: 36234
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36200
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)