Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0180
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 4.3
U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical pr... 27 5.7
AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative pota... 27 5.7
AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical ... 27 5.7
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 10.0
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 28.7 bits (61), Expect = 2.5
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -1
Query: 496 PVSAGCRSFRQQQDLARFVGPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTF 317
PVS+ S + DLA+ + PF G+ S+ CP+ + +++ +R H S
Sbjct: 303 PVSSTPDSIEVRSDLAKALEPFLGM---SAAWCPISVSREGSSSNSYKRGSGSHKAISML 359
Query: 316 SSSMYSWH-SSAFSGIFG-FRHP 254
S + + AF +FG HP
Sbjct: 360 SKFQATIDLAGAFGELFGKVEHP 382
>Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical
protein C33D3.5 protein.
Length = 546
Score = 28.3 bits (60), Expect = 3.3
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 282 NALECHEYIEDENVEFPTCCA--RLRCVVEVNGERIVQTRGQPGELFPDKPWKGPTKRAK 455
N +E E+ +E +E PT R V N R+ Q LFP P K TK +
Sbjct: 185 NDIELQEFEPEEVIEMPTSHPDHAPREVSTQNTPRVYQA-----VLFPTIPRKRKTKASN 239
Query: 456 SCCCRNERHPA 488
CC E A
Sbjct: 240 FCCSAKEARSA 250
>Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical
protein C33D3.5 protein.
Length = 546
Score = 28.3 bits (60), Expect = 3.3
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +3
Query: 282 NALECHEYIEDENVEFPTCCA--RLRCVVEVNGERIVQTRGQPGELFPDKPWKGPTKRAK 455
N +E E+ +E +E PT R V N R+ Q LFP P K TK +
Sbjct: 185 NDIELQEFEPEEVIEMPTSHPDHAPREVSTQNTPRVYQA-----VLFPTIPRKRKTKASN 239
Query: 456 SCCCRNERHPA 488
CC E A
Sbjct: 240 FCCSAKEARSA 250
>Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical
protein F42A8.1 protein.
Length = 370
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 121 DVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVD--VENQKYRKTHWN 294
+ Y ACV R YQ + W+D + YRC DG+ ++ + + K R+
Sbjct: 103 EFGYSACVGTDGRT-YQKGETWTDAKNTYYYRCR-DDGRVVKTTIEGCIAHDKQRRVPLG 160
Query: 295 ATN 303
T+
Sbjct: 161 QTD 163
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 421 SGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278
S ++SP + + +P TSTT + + +ST SSS+ S SS S
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQS 527
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 421 SGNSSPGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSWHSSAFS 278
S ++SP + + +P TSTT + + +ST SSS+ S SS S
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQS 527
>U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical
protein C24B5.1 protein.
Length = 427
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 371 IYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFW 267
IYF D Q R + IF+ F+A C F W
Sbjct: 140 IYFYDIFQDSLLRNSYYSCIFNTFLAHVCDFASVW 174
>Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical
protein C40C9.1 protein.
Length = 364
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 210 LQMRDQRREILHS-CCGCRKPKIPEN 284
L+ R RR I + CCGC KP+ P +
Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPPRH 344
>AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative
potassium channel subunitn2P20 protein.
Length = 364
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 210 LQMRDQRREILHS-CCGCRKPKIPEN 284
L+ R RR I + CCGC KP+ P +
Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPPRH 344
>AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical
protein T20H9.1 protein.
Length = 312
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 380 SLSIYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFWFSTS 255
SLS+ FD T+ + D++ D F + F WFST+
Sbjct: 219 SLSVEFDFFTEENAIKIRDDLMKRDTFRRCEVWFNSSWFSTA 260
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +1
Query: 247 AAVDVENQKYRKTHWNATNTSKMRMSNSPRAVRDCVASSK*MERE*CKPEGSLANCSPIN 426
A ++V+++++ + + N + R + + D V + + + E E SP +
Sbjct: 496 APMEVDDERHSASSGSTENNYRRRTDSEESEILDVVGTDEPDKDEKGGTETETPTPSPED 555
Query: 427 HGRGQQNE 450
HGR QN+
Sbjct: 556 HGRQTQNK 563
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 246 SCCGCRKPKIPENALECHEYIEDENVEFPTCCA 344
SCCG RK I EC +D + T CA
Sbjct: 868 SCCGARKKVIVGRTFECSS-ADDSDAAPSTLCA 899
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 88 CCLVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHR 210
CC++ P ++ DV RKGY+ + + TC R
Sbjct: 295 CCILTPQINCTDVLTGCLTHLCDRKGYRQFMTNNCAKTCAR 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,677,303
Number of Sequences: 27780
Number of extensions: 279740
Number of successful extensions: 858
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -