Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0180
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.1  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   7.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   9.4  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   9.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 409 NCSPINHGRGQQNEPNPAVVGMSGIQQ 489
           N SP +   GQQ +     +G+ G+QQ
Sbjct: 816 NSSPSSVQSGQQQQSVLQGLGVQGVQQ 842


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
 Frame = -1

Query: 484 GCRSFRQQQDLARFVGP----FHGLSGNSSPGC 398
           G       Q LA+ V      F GL GNS+ GC
Sbjct: 295 GSEDILNTQSLAKAVSKNGVLFVGLVGNSAVGC 327


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 311 R*ECRIPHVLCAIALRRRSKWRE 379
           R EC +P   CA+  + +   +E
Sbjct: 50  RPECMVPEYQCAVKRKEKKAQKE 72


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 498 DRCLLDAAHSDNSRIWLVLLAPS 430
           D  LLDA  S N+ +W+ L   S
Sbjct: 399 DELLLDADWSVNAGMWMWLSCSS 421


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 275 YFWFSTSTAAMKYFPSLI 222
           Y WF+TS    + F  LI
Sbjct: 549 YIWFTTSGTISEKFRKLI 566


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 275 YFWFSTSTAAMKYFPSLI 222
           Y WF+TS    + F  LI
Sbjct: 602 YIWFTTSGTISEKFRKLI 619


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 445 NEPNPAVVGMSGIQQTPV 498
           NE   A++G+   Q TPV
Sbjct: 17  NETAKAIIGVDECQATPV 34


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 409  SPGCPLVCTILSPFTST 359
            +PG P   T LSP ++T
Sbjct: 1498 APGIPPAATFLSPNSTT 1514


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 409  SPGCPLVCTILSPFTST 359
            +PG P   T LSP ++T
Sbjct: 1494 APGIPPAATFLSPNSTT 1510


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,235
Number of Sequences: 438
Number of extensions: 3589
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)