Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0178
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021714-1|AAH21714.1|  876|Homo sapiens PTPRF interacting prote...    31   1.7  
AF034803-1|AAC26104.1|  783|Homo sapiens liprin-beta2 protein.         31   1.7  

>BC021714-1|AAH21714.1|  876|Homo sapiens PTPRF interacting protein,
           binding protein 2 (liprin beta 2) protein.
          Length = 876

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 446 FHAEHSYVTCPRRSCGGTPGFRSPPFPPTI 357
           F AEH Y T P +  G TP   +   PPTI
Sbjct: 416 FLAEHKYPTLPGKLSGATPNGEAAKSPPTI 445


>AF034803-1|AAC26104.1|  783|Homo sapiens liprin-beta2 protein.
          Length = 783

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 446 FHAEHSYVTCPRRSCGGTPGFRSPPFPPTI 357
           F AEH Y T P +  G TP   +   PPTI
Sbjct: 323 FLAEHKYPTLPGKLSGATPNGEAAKSPPTI 352


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,460,985
Number of Sequences: 237096
Number of extensions: 1335835
Number of successful extensions: 3132
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3128
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)