Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0178
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121648-1|AAM51975.1|  447|Drosophila melanogaster LD21713p pro...    36   0.023
AE014297-3450|AAN13980.1|  447|Drosophila melanogaster CG5991-PC...    36   0.023
AE014297-3449|AAN13979.1|  447|Drosophila melanogaster CG5991-PB...    36   0.023
AE014297-3448|AAF56228.1|  447|Drosophila melanogaster CG5991-PA...    36   0.023
AF079556-1|AAC28734.1|  768|Drosophila melanogaster poly(ADP-rib...    28   6.1  
AE014298-545|AAF45886.1|  768|Drosophila melanogaster CG2864-PA ...    28   6.1  

>AY121648-1|AAM51975.1|  447|Drosophila melanogaster LD21713p
           protein.
          Length = 447

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 305 SKVEIKFYEKFPXPVTSRLWGEMAGCEIPGSLRSFV*G 418
           S+++ + Y   P  + SR WG +A C +P SLR +V G
Sbjct: 133 SELQSRIYCSLPLRIISRCWGWLAACYLPPSLRPYVYG 170


>AE014297-3450|AAN13980.1|  447|Drosophila melanogaster CG5991-PC,
           isoform C protein.
          Length = 447

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 305 SKVEIKFYEKFPXPVTSRLWGEMAGCEIPGSLRSFV*G 418
           S+++ + Y   P  + SR WG +A C +P SLR +V G
Sbjct: 133 SELQSRIYCSLPLRIISRCWGWLAACYLPPSLRPYVYG 170


>AE014297-3449|AAN13979.1|  447|Drosophila melanogaster CG5991-PB,
           isoform B protein.
          Length = 447

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 305 SKVEIKFYEKFPXPVTSRLWGEMAGCEIPGSLRSFV*G 418
           S+++ + Y   P  + SR WG +A C +P SLR +V G
Sbjct: 133 SELQSRIYCSLPLRIISRCWGWLAACYLPPSLRPYVYG 170


>AE014297-3448|AAF56228.1|  447|Drosophila melanogaster CG5991-PA,
           isoform A protein.
          Length = 447

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 305 SKVEIKFYEKFPXPVTSRLWGEMAGCEIPGSLRSFV*G 418
           S+++ + Y   P  + SR WG +A C +P SLR +V G
Sbjct: 133 SELQSRIYCSLPLRIISRCWGWLAACYLPPSLRPYVYG 170


>AF079556-1|AAC28734.1|  768|Drosophila melanogaster
           poly(ADP-ribose) glycohydrolase protein.
          Length = 768

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 180 KTLCLNCARLSEGP 139
           K LCLNCAR+S+ P
Sbjct: 37  KALCLNCARMSKSP 50


>AE014298-545|AAF45886.1|  768|Drosophila melanogaster CG2864-PA
           protein.
          Length = 768

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 180 KTLCLNCARLSEGP 139
           K LCLNCAR+S+ P
Sbjct: 37  KALCLNCARMSKSP 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,151,393
Number of Sequences: 53049
Number of extensions: 407563
Number of successful extensions: 964
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)