Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0177
         (482 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061464-1|AAL29012.1|  254|Drosophila melanogaster LD41905p pro...    28   5.8  
AE013599-1877|AAF58255.1|  182|Drosophila melanogaster CG10102-P...    28   5.8  
AE013599-1876|AAF58256.1|  254|Drosophila melanogaster CG12505-P...    28   5.8  
AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,...    28   7.7  

>AY061464-1|AAL29012.1|  254|Drosophila melanogaster LD41905p
           protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 457 RKHRSNSELQYXAAIADISQHXNHDXEXPPELLKTALPRRGAKLNARXTSILVRGASLGN 278
           RKH S   +     + +  +   H+ +   E L TA   RG+K   R T    RG +  N
Sbjct: 180 RKHISRHSVHTFKDLLEQGRIIEHNNQEDEEQLATAKNTRGSKRTTRCTYCSFRGHTFDN 239


>AE013599-1877|AAF58255.1|  182|Drosophila melanogaster CG10102-PA
           protein.
          Length = 182

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 457 RKHRSNSELQYXAAIADISQHXNHDXEXPPELLKTALPRRGAKLNARXTSILVRGASLGN 278
           RKH S   +     + +  +   H+ +   E L TA   RG+K   R T    RG +  N
Sbjct: 108 RKHISRHSVHTFKDLLEQGRIIEHNNQEDEEQLATAKNTRGSKRTTRCTYCSFRGHTFDN 167


>AE013599-1876|AAF58256.1|  254|Drosophila melanogaster CG12505-PA
           protein.
          Length = 254

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 457 RKHRSNSELQYXAAIADISQHXNHDXEXPPELLKTALPRRGAKLNARXTSILVRGASLGN 278
           RKH S   +     + +  +   H+ +   E L TA   RG+K   R T    RG +  N
Sbjct: 180 RKHISRHSVHTFKDLLEQGRIIEHNNQEDEEQLATAKNTRGSKRTTRCTYCSFRGHTFDN 239


>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
           isoform B protein.
          Length = 2833

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -3

Query: 459 NENTVRTASYNIXRPSPTFPNIXTTTANXLQSS*RPRCHDAERSSTRAXRPYSSEERRSG 280
           N N    +S    R SPT  ++ T T+N   SS + R +D   +  R  + YSS+ R+  
Sbjct: 298 NRNDSNCSSVVFERTSPTALSVSTETSNISYSS-QERLNDGAPAIGRMCK-YSSKIRQLK 355

Query: 279 TETA 268
           +E A
Sbjct: 356 SENA 359


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,106,421
Number of Sequences: 53049
Number of extensions: 298322
Number of successful extensions: 1075
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)