Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0174
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 159 9e-40
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 157 6e-39
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 139 1e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 116 1e-26
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 1e-21
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 1e-20
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 95 2e-20
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 95 2e-20
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 95 4e-20
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 5e-20
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 93 1e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 2e-18
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 1e-17
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 67 9e-12
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 59 2e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 54 9e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 48 3e-06
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 44 9e-05
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 36 0.025
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.075
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 34 0.075
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 30 1.2
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 29 2.1
SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9) 28 4.9
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 159 bits (387), Expect = 9e-40
Identities = 74/81 (91%), Positives = 76/81 (93%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGHY 436
INVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQS AGNN AKGHY
Sbjct: 260 INVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 319
Query: 437 TXGA*LVDSVLDVVRKEAEGC 499
T GA LVDSVLDVVRKEAE C
Sbjct: 320 TEGAELVDSVLDVVRKEAESC 340
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 258
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 159 bits (386), Expect = 1e-39
Identities = 73/81 (90%), Positives = 76/81 (93%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGHY 436
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQS AGNN AKGHY
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TXGA*LVDSVLDVVRKEAEGC 499
T GA LVDSVLDVVRKEAE C
Sbjct: 107 TEGAELVDSVLDVVRKEAESC 127
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 157 bits (380), Expect = 6e-39
Identities = 71/81 (87%), Positives = 76/81 (93%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGHY 436
INVYYNEA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQS AGNN AKGHY
Sbjct: 47 INVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TXGA*LVDSVLDVVRKEAEGC 499
T GA L+DSVLDVVRKEAE C
Sbjct: 107 TEGAELMDSVLDVVRKEAESC 127
Score = 90.2 bits (214), Expect = 8e-19
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 139 bits (337), Expect = 1e-33
Identities = 65/71 (91%), Positives = 66/71 (92%)
Frame = +2
Query: 287 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA*LVDSV 466
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQS AGNN AKGHYT GA LVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 467 LDVVRKEAEGC 499
LDVVRKEAE C
Sbjct: 62 LDVVRKEAESC 72
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 116 bits (279), Expect = 1e-26
Identities = 49/73 (67%), Positives = 61/73 (83%)
Frame = +2
Query: 281 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA*LVD 460
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QS A NN AKGHY+ GA L+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 461 SVLDVVRKEAEGC 499
++ DV+RKEAE C
Sbjct: 71 NIFDVLRKEAENC 83
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 99 bits (238), Expect = 1e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 394
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 96.3 bits (229), Expect = 1e-20
Identities = 40/82 (48%), Positives = 57/82 (69%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 48 SFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G ++D+VLD +RK A+GC
Sbjct: 108 YTVGKEMIDTVLDRLRKLADGC 129
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGH 107
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G +VD VLD +RK A+ C
Sbjct: 108 YTVGKEIVDLVLDRIRKLADQC 129
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 481 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 540
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G +VD VLD +RK A+ C
Sbjct: 541 YTVGKEIVDLVLDRIRKLADQC 562
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 95.5 bits (227), Expect = 2e-20
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 633 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 692
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G L+D VLD +RK A+ C
Sbjct: 693 YTVGKELIDLVLDRIRKLADQC 714
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/82 (50%), Positives = 56/82 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 112 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 171
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G +VD VLD +RK A+ C
Sbjct: 172 YTIGKEIVDLVLDRIRKLADQC 193
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSV 346
S N +++E GK+VPRAV VDLEP + +
Sbjct: 560 SFNTFFSETGAGKHVPRAVFVDLEPTVRECI 590
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 117 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 94.7 bits (225), Expect = 4e-20
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 47 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 106
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G ++D VLD +RK A+ C
Sbjct: 107 YTVGKEIIDLVLDRIRKLADQC 128
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 94.3 bits (224), Expect = 5e-20
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN A+GH
Sbjct: 466 SFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGH 525
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G +D+VLD +RK A+ C
Sbjct: 526 YTVGKDHIDNVLDRIRKLADQC 547
Score = 91.1 bits (216), Expect = 5e-19
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 33 SFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 92
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G L++ VLD +RK A+ C
Sbjct: 93 YTVGKQLIEIVLDRLRKLADQC 114
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
+ N ++ E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 419 AFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 478
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G +D VLD +RK A+GC
Sbjct: 479 YTVGKEQIDIVLDRLRKLADGC 500
Score = 93.1 bits (221), Expect = 1e-19
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 852 SFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 911
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G ++D VLD +RK A+ C
Sbjct: 912 YTVGKEMIDLVLDRIRKLADQC 933
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G ++D VLD RK A+ C
Sbjct: 108 YTIGKEIIDLVLDRCRKLADQC 129
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 88.6 bits (210), Expect = 2e-18
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN A+GH
Sbjct: 13 SFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGH 72
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G +D LD +RK A+ C
Sbjct: 73 YTVGKEHIDLALDRIRKLADQC 94
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 86.2 bits (204), Expect = 1e-17
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +2
Query: 272 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA* 451
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN A+GHYT G
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 452 LVDSVLDVVRKEAEGC 499
+V+ V+D +RK + C
Sbjct: 1025 MVEVVMDKIRKMTDQC 1040
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 66.9 bits (156), Expect = 9e-12
Identities = 35/82 (42%), Positives = 46/82 (56%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGH 433
S N +++E GK+VPRAV VDLEP + P+ + G+ A NN A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGH 97
Query: 434 YTXGA*LVDSVLDVVRKEAEGC 499
YT G VD VLD +RK A+ C
Sbjct: 98 YTIGKQQVDQVLDRLRKLADQC 119
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 61.7 bits (143), Expect = 3e-10
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 338 DSVRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA*LVDSVLDVVRKEAEGC 499
D VR+G + Q+F P+ + G+ A NN A+GHYT G L+D VLD +RK A+ C
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC 66
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA*LVDSVLDVVRKEAEGC 499
VR+G + Q+F P+ + G+ A NN A+GHYT G L+D VLD +RK A+ C
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC 54
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA*LVDSVLDVVRK 484
VR+G + Q+F P+ + G+ A NN A+GHYT G L+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 53.6 bits (123), Expect = 9e-08
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA*LVDSVLDVVRKEAEGC 499
+R+G + Q+F P+ + G+ A NN A+GHYT G +D LD +RK A+ C
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQC 54
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 48.4 bits (110), Expect = 3e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSXAGNNXAKGHYTXGA*LVDSVLDVVRK 484
VR G + +F PD + G+ A NN A+GHYT G +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +2
Query: 398 QSXAGNNXAKGHYTXGA*LVDSVLDVVRKEAEGC 499
Q+ A NN AKG YT GA L+DS +D +RK AE C
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENC 35
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVR 349
S N +++E GGK+VPRAV VDLEP + ++
Sbjct: 48 SFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLEASMST 269
MRE + I GQ G QIG WE+ EHGI G D + + S ST
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFST 246
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 35.5 bits (78), Expect = 0.025
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQSX-AGNNXAKGHYTXGA*LVDSVLD 472
RAV +D+E + S G P F Q +GNN A G G +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 473 VVRKEAEGC 499
+V++E E C
Sbjct: 127 LVQREVEKC 135
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDE 200
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.9 bits (74), Expect = 0.075
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSXAGNN 418
RAV++D+E G ++++ GP +F + S GNN
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNN 114
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 33.9 bits (74), Expect = 0.075
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSXAGNNXAKGHY-----TXGA*LVD 460
R V VD E + S R G GQ R N + G+ GNN A G++ G L+
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 461 SVLDVVRKEAEGC 499
+D +RKE E C
Sbjct: 99 MTMDAMRKEVERC 111
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.7 bits (66), Expect = 0.70
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 177 FWEVISDEHGIDATG 221
FWEVI++EHGID G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 408 AXDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 286
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 198 EHGIDATGAYSGDSDLQLEASMSTITK 278
+HG+ TG + GDSD +L+A++ +K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9)
Length = 433
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 454 QLSPXCVMXF--RXVIPRPRLSEDEVVRSEDLPKRPGTDGVHGSRLKVH 314
+L P V + + +P P S+++ +SE + RPG D SR VH
Sbjct: 49 ELQPKTVDYYTDKLALPPPLYSQNDHQKSEHILLRPGVDLKTASRCTVH 97
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 399 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 277
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 190 SRTSTALTPRVLTAATPTCSLKHQCLL*RSFRGQVRPASC 309
++ S LT L A P KH+C + + +G +R ASC
Sbjct: 181 TKQSRKLTFIALCATHPRNVAKHRCDIDKGHQGSLRKASC 220
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,986,348
Number of Sequences: 59808
Number of extensions: 324414
Number of successful extensions: 797
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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