Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0173
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 133 2e-30
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 107 1e-22
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 99 3e-20
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 95 1e-18
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 93 5e-18
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 89 5e-17
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 82 7e-15
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 82 7e-15
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 82 7e-15
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 74 2e-12
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 74 3e-12
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 73 6e-12
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 69 5e-11
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 66 5e-10
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 64 2e-09
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 64 3e-09
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 58 1e-07
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 58 2e-07
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 56 4e-07
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 56 7e-07
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 53 5e-06
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 53 5e-06
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 51 2e-05
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 50 4e-05
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 50 5e-05
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 49 8e-05
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 48 1e-04
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 48 1e-04
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 48 1e-04
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 47 3e-04
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 46 6e-04
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 45 0.001
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 44 0.002
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 44 0.002
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 42 0.007
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.012
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 39 0.088
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 38 0.12
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.12
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 37 0.27
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.27
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 37 0.35
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.47
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.4
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 1.4
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 1.9
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 1.9
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 3.3
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 4.4
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 33 4.4
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 5.8
UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2; Clos... 33 5.8
UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA... 33 5.8
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 5.8
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 7.6
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 133 bits (322), Expect = 2e-30
Identities = 65/85 (76%), Positives = 70/85 (82%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGVT GFQYKMRAVYAHFPI CVT+E N++IEIRNFLGEKYI R +MAP VTVVNS K
Sbjct: 80 KGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQK 139
Query: 435 XGLIXEGNSLEDVSSSAALIQQSTT 509
LI EGN +E VS SAALIQQSTT
Sbjct: 140 DELIVEGNDIESVSGSAALIQQSTT 164
Score = 111 bits (268), Expect = 8e-24
Identities = 52/80 (65%), Positives = 64/80 (80%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 199 SKKELAAVRTXCSHVENMIK 258
+KKELAAVRT CSH+ENMIK
Sbjct: 61 TKKELAAVRTVCSHIENMIK 80
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 107 bits (258), Expect = 1e-22
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGVT GF+YKMR+VYAHFPI V E S++EIRNFLGEKYI R +M P V S K
Sbjct: 82 KGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQK 141
Query: 435 XGLIXEGNSLEDVSSSAALIQQSTT 509
LI EGN +E VS+SAALIQQ+TT
Sbjct: 142 DELILEGNDIELVSNSAALIQQATT 166
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/82 (51%), Positives = 62/82 (75%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKW 192
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 193 FGSKKELAAVRTXCSHVENMIK 258
+G++KELA VRT CSHV+NMIK
Sbjct: 61 WGNRKELATVRTICSHVQNMIK 82
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 99 bits (238), Expect = 3e-20
Identities = 43/80 (53%), Positives = 59/80 (73%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 199 SKKELAAVRTXCSHVENMIK 258
+KE+AA+RT CSH++NMIK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIK 80
Score = 66.1 bits (154), Expect = 5e-10
Identities = 28/42 (66%), Positives = 33/42 (78%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYI 380
KGVTKGF+YKMR+VYAHFPI +G +EIRNFLGEK +
Sbjct: 80 KGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIV 121
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/81 (56%), Positives = 56/81 (69%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GVTKG++YKMR VYAHFPI T N+ IEIRNFLGEK + + M VT++ S K K
Sbjct: 82 GVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKD 141
Query: 438 GLIXEGNSLEDVSSSAALIQQ 500
L+ +GN +E VS SAALI Q
Sbjct: 142 ELVLDGNDIELVSRSAALINQ 162
Score = 91.9 bits (218), Expect = 9e-18
Identities = 40/80 (50%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 195
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 196 GSKKELAAVRTXCSHVENMI 255
G+++ +AA+RT SHV+N+I
Sbjct: 61 GTRRTMAAIRTAISHVQNLI 80
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 92.7 bits (220), Expect = 5e-18
Identities = 47/81 (58%), Positives = 56/81 (69%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GVT+GF+YKMR VYAHFPI TE +++EIRNFLGE+ K P VTV S K
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 438 GLIXEGNSLEDVSSSAALIQQ 500
+I EGNSLE+VS SAA I+Q
Sbjct: 141 EIILEGNSLENVSQSAANIKQ 161
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 201
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 202 KKELAAVRTXCSHVENMI 255
+K A +R+ S + NMI
Sbjct: 62 RKHNACIRSVYSIINNMI 79
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 89.4 bits (212), Expect = 5e-17
Identities = 43/92 (46%), Positives = 58/92 (63%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GVTKG++YKMR VYAHFPI T+G ++EIRNF GEK + R ++ +T + K K
Sbjct: 99 GVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKD 158
Query: 438 GLIXEGNSLEDVSSSAALIQQSTTSRLXYXEV 533
++ GNSLE +S S A IQ S + Y +V
Sbjct: 159 EIVLTGNSLELLSQSCATIQ--LRSAIKYKDV 188
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +1
Query: 64 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTXCSHV 243
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 244 ENMI 255
ENMI
Sbjct: 94 ENMI 97
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/87 (49%), Positives = 52/87 (59%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGVT GFQYKMRAVYAHFPI + EIRNFLGEK + M VT+ K
Sbjct: 142 KGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQK 201
Query: 435 XGLIXEGNSLEDVSSSAALIQQSTTSR 515
++ EGN ++ VS SAAL+ +T R
Sbjct: 202 DQVLVEGNDIDLVSQSAALLHGATLVR 228
Score = 33.9 bits (74), Expect = 2.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 129
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 82.2 bits (194), Expect = 7e-15
Identities = 39/82 (47%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 192
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 193 FGSKKELAAVRTXCSHVENMIK 258
+G++KELA V T CS V+N IK
Sbjct: 61 WGNRKELATVHTICSPVQNTIK 82
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 82.2 bits (194), Expect = 7e-15
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGVT GF+YKMR YAHFPI + N IEIRNF+ + R + P VT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 435 XGLIXEGNSLEDVSSSAALIQQS 503
LI G S+EDVS +AA I +S
Sbjct: 138 DELILRGISIEDVSHTAARIHES 160
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +1
Query: 28 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 208 ELAAVRTXCSHVENMIK 258
A RT CSH+ENM K
Sbjct: 62 RNALPRTICSHIENMFK 78
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 82.2 bits (194), Expect = 7e-15
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXC--VTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKX 431
GVTKG++YKMR VYAHFPI V +G IE+RNFLG+K I + VT+ S
Sbjct: 81 GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNV 140
Query: 432 KXGLIXEGNSLEDVSSSAALIQQ 500
K ++ GNS+EDVS +AA +QQ
Sbjct: 141 KDEIVLSGNSVEDVSQNAADLQQ 163
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 199 SKKELAAVRTXCSHVENMI 255
+K +AA+RT S V+NMI
Sbjct: 61 GRKHVAALRTVKSLVDNMI 79
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = +1
Query: 19 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 186
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 187 KWFGSKKELAAVRTXCSHVENMI 255
WFG K A +RT CSH+ENMI
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMI 142
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFL 365
GV + +QYK+R VYAHFPI T S IEIRNFL
Sbjct: 144 GVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 73.7 bits (173), Expect = 3e-12
Identities = 39/86 (45%), Positives = 50/86 (58%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK +M V V K +
Sbjct: 91 GVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVVKKLGKDE- 149
Query: 438 GLIXEGNSLEDVSSSAALIQQSTTSR 515
+ EGN +E VS SAA I + R
Sbjct: 150 -ICLEGNDVEKVSQSAANIHAANLVR 174
Score = 58.8 bits (136), Expect = 8e-08
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 192
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 193 FGSKKELAAVRTXCSHVENMI 255
+G++++ A VRT SH++NMI
Sbjct: 69 YGNRRDSAVVRTIASHIKNMI 89
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 72.5 bits (170), Expect = 6e-12
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +3
Query: 201 QKGACRREDXLFTCREHDKGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYI 380
+K C+ R +GVT G+++KM YAHFPI +EI+NFLGEK I
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 381 XRXKMAPXVTVV-NSPKXKXGLIXEGNSLEDVSSSAALIQQS 503
K P VT+ N + K L +GN L +VS + ALI Q+
Sbjct: 131 RTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQA 172
Score = 58.0 bits (134), Expect = 1e-07
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 171
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 172 LLKVEKWFGSKKELAAVRTXCSHVENMIK 258
+ V W +K+ V + S + NMI+
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIR 89
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 69.3 bits (162), Expect = 5e-11
Identities = 36/86 (41%), Positives = 51/86 (59%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GV+ GF+Y ++ +YAHFPI T+ S +EIRNFLGEK I + M V + + K
Sbjct: 82 GVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKD 141
Query: 438 GLIXEGNSLEDVSSSAALIQQSTTSR 515
+ G+ L VS +AA IQQS ++
Sbjct: 142 EISVFGSDLNLVSLNAASIQQSCQAK 167
Score = 49.2 bits (112), Expect = 6e-05
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 195
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 196 GSKKELAAVRTXCSHVENMI 255
KK+LA + T SH+ NMI
Sbjct: 61 AGKKQLAKLNTIASHITNMI 80
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 66.1 bits (154), Expect = 5e-10
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGVT+GF YK++ VY+HFPI V +G+ +I I NFLGEK + K+ P VTV +
Sbjct: 80 KGVTEGFTYKLKVVYSHFPI-SVKVQGDEVI-IENFLGEKAPRKAKILPGVTVKVRGQE- 136
Query: 435 XGLIXEGNSLEDVSSSAALIQQST 506
+I EG E V +AA I+Q+T
Sbjct: 137 --IIVEGIDKEAVGQTAANIEQAT 158
Score = 52.0 bits (119), Expect = 9e-06
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 220 VRTXCSHVENMIK 258
RT +H+ NMIK
Sbjct: 68 ARTFAAHIRNMIK 80
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK R K+ P VTV K K
Sbjct: 80 KGVTEGFKYRLKVVYSHFPM-TVKVQGDEVV-IENFLGEKNPRRAKILPGVTV----KVK 133
Query: 435 XGLI-XEGNSLEDVSSSAALIQQST 506
I EG E V +AA I+Q+T
Sbjct: 134 GSEIEVEGIDKEAVGQTAANIEQAT 158
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/73 (39%), Positives = 48/73 (65%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 220 VRTXCSHVENMIK 258
VRT +H+ NMIK
Sbjct: 68 VRTFKAHINNMIK 80
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 63.7 bits (148), Expect = 3e-09
Identities = 35/80 (43%), Positives = 44/80 (55%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
K VT GF Y M+AVY HF I E I+ ++NFLGEK + R +M V + K
Sbjct: 99 KAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERK 157
Query: 435 XGLIXEGNSLEDVSSSAALI 494
++ EG SL DVS SA I
Sbjct: 158 DTIVIEGPSLSDVSQSAGTI 177
Score = 37.9 bits (84), Expect = 0.15
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 4 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 177
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 178 KVEKWFGSKKELAAVRTXCSHVENMIK 258
++ W G +K +A T S + N IK
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIK 99
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ R K+ V S +
Sbjct: 99 GVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ--- 153
Query: 438 GLIXEGNSLEDVSSSAALIQQST 506
+ G +E+ +AA ++Q+T
Sbjct: 154 DIYVRGIDIEECGQTAANLEQAT 176
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 192
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 193 FGSKKELAAVRTXCSHVENMIK 258
+ K LA T SHV+NMIK
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIK 75
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 56.4 bits (130), Expect = 4e-07
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + V V K K
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKE 140
Query: 438 GLIXEGNSLEDVSSSAALIQQST 506
++ EG E VS+ AA +Q +T
Sbjct: 141 DIVIEGIDRELVSTFAAAVQAAT 163
Score = 35.1 bits (77), Expect = 1.1
Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 183
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 184 EKWFGSKKELAAVRTXCSHVENM 252
E + K+E A + T ++NM
Sbjct: 60 EVFKARKREYAILGTYKGILKNM 82
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 55.6 bits (128), Expect = 7e-07
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +3
Query: 222 EDXLFTCREHDKGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAP 401
++ L +C EHD+G GF Y+MR+VYA FP + E S+IE + +G+KYI R ++
Sbjct: 20 QNHLQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 402 XVTVVNSPKXKXGLI 446
V S K L+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 52.8 bits (121), Expect = 5e-06
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 195
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 196 GSKKELAAVRTXCSHVENMI 255
+KK+ A V T S + NMI
Sbjct: 60 ATKKDYALVGTIASIINNMI 79
Score = 52.0 bits (119), Expect = 9e-06
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GVTKG++YK++ VYAHFP+ + E + II I NFLGE+ ++A + K
Sbjct: 81 GVTKGYRYKLKIVYAHFPM-SLKVEKDKII-IENFLGER---GKRIAGIMPGAKVKIEKD 135
Query: 438 GLIXEGNSLEDVSSSAALIQQSTTSR 515
+I EG L+ V+ +AA I +T R
Sbjct: 136 DVIVEGIDLDAVAQTAANIHLATHLR 161
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 52.8 bits (121), Expect = 5e-06
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK + ++A +
Sbjct: 79 GVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEK---KPRIAKILGETKVKVSGN 133
Query: 438 GLIXEGNSLEDVSSSAALIQQST 506
++ G + EDV +AA I+Q T
Sbjct: 134 EIVVSGINKEDVGQTAANIEQKT 156
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 225
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 226 TXCSHVENMI 255
T SH++N+I
Sbjct: 68 TFASHLKNLI 77
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK K+ VTV
Sbjct: 76 RGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTV---KIGN 130
Query: 435 XGLIXEGNSLEDVSSSAALIQQST 506
+ G E V ++AA I+ +T
Sbjct: 131 DEVTITGIDKEKVGNTAANIEHAT 154
Score = 41.5 bits (93), Expect = 0.012
Identities = 24/73 (32%), Positives = 41/73 (56%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 220 VRTXCSHVENMIK 258
T +H +NMI+
Sbjct: 64 TGTLEAHAKNMIR 76
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 50.0 bits (114), Expect = 4e-05
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
+GV G+ K++ VYAHFPI + ++I + NF GE+ + K+ VV+ +
Sbjct: 64 EGVGVGYTIKLKVVYAHFPI--TIKQDGAMILVENFQGERSARKAKIVGGTKVVSKGE-- 119
Query: 435 XGLIXEGNSLEDVSSSAALIQQST 506
+I G+ L DVS +AA ++Q T
Sbjct: 120 -DVIVTGHVLTDVSQTAANLEQGT 142
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 49.6 bits (113), Expect = 5e-05
Identities = 21/80 (26%), Positives = 47/80 (58%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 199 SKKELAAVRTXCSHVENMIK 258
+++E + T SH++NM++
Sbjct: 60 TRREKRLINTWRSHIKNMLE 79
Score = 49.6 bits (113), Expect = 5e-05
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Frame = +3
Query: 210 ACRREDXLF-TCREHDKGVTKGFQ----YKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEK 374
A RRE L T R H K + +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 375 --YIXRXKMAPXVTV-VNSPKXKXGLIXEGNSLEDVSSSAALIQQST 506
I V V + K + ++ E E A++I+QST
Sbjct: 117 APIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQST 163
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 48.8 bits (111), Expect = 8e-05
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTV-VNSPKXK 434
GVT G++YKM VY+HFPI +E + F+G K V + N K
Sbjct: 89 GVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAK 148
Query: 435 XGLIXEGNSLEDVSSSAALIQQST 506
+ EG +LEDVS I Q T
Sbjct: 149 DEINIEGANLEDVSLVCGQIHQLT 172
Score = 37.9 bits (84), Expect = 0.15
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 180
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 181 VEKWFGSKKELAAVRTXCSHVENMI 255
WFG++K LA + T V+NMI
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 48.0 bits (109), Expect = 1e-04
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GV+KGF Y ++ VY+HFPI + + +EI N G K I + V V + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 438 GLIXEGNSLEDVSSSAALIQ 497
+I +E + ++LIQ
Sbjct: 143 EIILLSKDIETLGILSSLIQ 162
Score = 40.7 bits (91), Expect = 0.022
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 192
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 193 FGSKKELAAVRTXCSHVENMI 255
+ +K A VRT S + NMI
Sbjct: 61 YNNKSSSAIVRTITSIIYNMI 81
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ + A V
Sbjct: 79 KGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGER---SPRTAEIVGETQVSVKG 133
Query: 435 XGLIXEGNSLEDVSSSAALIQQST 506
L G S +DV +AA I+++T
Sbjct: 134 DRLFLNGPSKKDVGETAANIERAT 157
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 48.0 bits (109), Expect = 1e-04
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGVT+G +YK++ VY+HFP + + I NF+GE ++A V N+
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENV---PRVAEIVDPENTEVIV 153
Query: 435 XG--LIXEGNSLEDVSSSAALIQQST 506
G +I G E V +AA ++Q+T
Sbjct: 154 QGQDIIVRGIDKEAVGQTAANLEQAT 179
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 47.2 bits (107), Expect = 3e-04
Identities = 31/83 (37%), Positives = 44/83 (53%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXKX 437
GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK R + V +
Sbjct: 76 GVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTIHGDTDVEIDGEE-- 131
Query: 438 GLIXEGNSLEDVSSSAALIQQST 506
L G +E V +AA I+Q T
Sbjct: 132 -LTVSGPDIEAVGQTAADIEQLT 153
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 46.0 bits (104), Expect = 6e-04
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAP--XVTVVNSPK 428
+GV GF+YK++AVY+HFP+ + GN + + N GEK + R P V +
Sbjct: 80 RGVDSGFEYKLKAVYSHFPM-TIRVNGNQ-MTVTNLFGEK-VPRVAALPWSPAEVEVKVQ 136
Query: 429 XKXGLIXEGNSLEDVSSSAALIQQS 503
K + G E V +AA I++S
Sbjct: 137 NKTDVTVSGADREKVGQTAANIERS 161
Score = 38.7 bits (86), Expect = 0.088
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 223 RTXCSHVENMIK 258
T +H+ NM +
Sbjct: 69 GTWAAHLTNMAR 80
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 45.2 bits (102), Expect = 0.001
Identities = 34/84 (40%), Positives = 43/84 (51%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
KGV+ GF+YK+R+VYAHFP+ V +M V S K
Sbjct: 47 KGVSLGFRYKVRSVYAHFPLNVV----------------------QMRTGVACSVSQAQK 84
Query: 435 XGLIXEGNSLEDVSSSAALIQQST 506
LI EGN E VS+SAALIQ++T
Sbjct: 85 DELILEGNDTELVSNSAALIQKAT 108
Score = 35.5 bits (78), Expect = 0.82
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 205 KELAAVRTXCSHVENMIK 258
KELA VRT CSHV+NMIK
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/80 (27%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 195
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 196 GSKKELAAVRTXCSHVENMI 255
+++ A + + +H++NMI
Sbjct: 63 ADRRKKALLYSIIAHIKNMI 82
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/87 (34%), Positives = 46/87 (52%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKYIXRXKMAPXVTVVNSPKXK 434
+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK K+ V S K
Sbjct: 79 EGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV--SVKGD 134
Query: 435 XGLIXEGNSLEDVSSSAALIQQSTTSR 515
+ G + +AA I+++T R
Sbjct: 135 R-ITINGIDKRKIGETAANIERATYIR 160
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 42.3 bits (95), Expect = 0.007
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 195
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 196 GSKKELAAVR-TXCSHVENMIK 258
+K L A+R T SHV NMIK
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIK 86
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.012
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 174
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 38.7 bits (86), Expect = 0.088
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 211 LAAVRTXCSHVENMI 255
A T S + NM+
Sbjct: 62 RALHGTTRSLINNMV 76
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 38.3 bits (85), Expect = 0.12
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 207
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 208 ELAAVRTXCSHVENMIK 258
A T + V NM++
Sbjct: 63 TRAMAGTTRALVNNMVQ 79
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.12
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 135
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.1 bits (82), Expect = 0.27
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +1
Query: 85 RLVTVKGPRGVLKRNFKHLAVDIRM 159
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.27
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 36.7 bits (81), Expect = 0.35
Identities = 21/93 (22%), Positives = 48/93 (51%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 223 RTXCSHVENMIKX*LKXSNTRCVLCMLTSPXTV 321
T S + N+ + ++ + + P TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.47
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 138
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 123
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 1.4
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 174
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 1.9
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -1
Query: 251 MFSTCEQXVLTAASSFLXPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRRDF 78
+F+ C + V+ A+S L P+H + R GF + TA + FL R PL + R F
Sbjct: 24 LFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLRCF 83
Query: 77 T 75
+
Sbjct: 84 S 84
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 1.9
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 138
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 3.3
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 4.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 33.1 bits (72), Expect = 4.4
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 208 ELAAVRTXCSHVENMIK 258
A T S + NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 5.8
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 159
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2;
Clostridium|Rep: Signal peptidase I precursor -
Clostridium cellulolyticum H10
Length = 189
Score = 32.7 bits (71), Expect = 5.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 280 YWXPLVTPLSCSLHVNRXSSRRQAPFWXRTISQPSGDE 167
+W ++ PL ++ V+R S Q FW + + +GDE
Sbjct: 80 FWDNVIDPLKYNILVSRFSDNNQQVFWVKRVIGKAGDE 117
>UniRef50_Q7Q7P3 Cluster: DNA polymerase; n=6; Eukaryota|Rep: DNA
polymerase - Anopheles gambiae str. PEST
Length = 2225
Score = 32.7 bits (71), Expect = 5.8
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 270 GFQYKMRAVYAHFPIXCVTTEGNSIIEIRNFLGEKY 377
G +YK +YA + + +T +GNS+ E+ FLG+KY
Sbjct: 86 GSRYKTTVIYAPY-LLLITRDGNSL-EVAKFLGKKY 119
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 5.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 7.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 477,973,722
Number of Sequences: 1657284
Number of extensions: 8315176
Number of successful extensions: 17297
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 16929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17276
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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