Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0172
(499 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.38
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.38
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 25 0.50
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.87
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.87
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.87
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 2.0
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 2.7
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 21 6.2
AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochr... 21 6.2
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 8.1
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 8.1
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 25.0 bits (52), Expect = 0.38
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 459 LPADSRAXLXLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 328
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 25.0 bits (52), Expect = 0.38
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 459 LPADSRAXLXLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 328
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 24.6 bits (51), Expect = 0.50
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 270 GLQGHRPGLFPS*VQTYLRRK 332
G+ GH GL+PS V T +K
Sbjct: 215 GVTGHHSGLYPSAVDTTTNQK 235
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.87
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 459 LPADSRAXLXLAVAVGRSAIVALNIIAQ 376
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.87
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 459 LPADSRAXLXLAVAVGRSAIVALNIIAQ 376
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 0.87
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 459 LPADSRAXLXLAVAVGRSAIVALNIIAQ 376
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 2.0
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 196 HKCREQTDTKQQDELHGVRLQLWLQGSKDIVRDCFPVEFRLIFAENAIKL 345
HK E D + D++ LQ+ + + FP+++ L+F+E + L
Sbjct: 668 HKI-ETNDHEIIDKIEMFSLQILNERAGFSAAGFFPIDYSLVFSETKLLL 716
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 22.2 bits (45), Expect = 2.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 75 IPTSLTTFWRSSFTIASSSPITTVRLKRA 161
IPT T +SSF+I+S P T + ++
Sbjct: 11 IPTMARTPLKSSFSISSILPETALEAPKS 39
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.0 bits (42), Expect = 6.2
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 35 LFYVFSWHLCMLXDSDVPND---ILEEQLYNSVVVADYDSAVEKSKHLYEE 178
L+Y++S H +VP D + YN V+ ++ E+ + +Y +
Sbjct: 13 LYYIYSKHYSYWQSKNVPTDKPFLFFGSFYNLVIRKEH--IFERIRTIYNQ 61
>AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q2 protein.
Length = 126
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 351 VHKLNRVFGEDKSELNWETIPDDVL 277
VH ++R GED IP D +
Sbjct: 62 VHLISRALGEDVRTQKGYLIPKDTI 86
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 20.6 bits (41), Expect = 8.1
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -2
Query: 219 ISLFTTFVMTSLFFSSYK 166
+++ T +T +FF+SY+
Sbjct: 152 VTIVATLTVTIIFFASYQ 169
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 20.6 bits (41), Expect = 8.1
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -2
Query: 219 ISLFTTFVMTSLFFSSYK 166
+++ T +T +FF+SY+
Sbjct: 152 VTIVATLTVTIIFFASYQ 169
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,839
Number of Sequences: 336
Number of extensions: 1545
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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