Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0165
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...   118   3e-27
AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical ...    79   2e-15
U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like pr...    31   0.61 
Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z78545-3|CAB01767.1|  306|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AF016661-2|AAB66051.1|  246|Caenorhabditis elegans Hypothetical ...    27   5.7  
Z81062-10|CAB02940.1|   79|Caenorhabditis elegans Hypothetical p...    27   7.6  
Z68118-8|CAA92189.2|  289|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AF303270-1|AAG50228.1|   79|Caenorhabditis elegans 2M776 protein.      27   7.6  
Z36237-1|CAA85271.2|  619|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U13076-1|AAA96984.1|  463|Caenorhabditis elegans steroid hormone...    27   10.0 
AY204167-1|AAO39171.1|  619|Caenorhabditis elegans nuclear recep...    27   10.0 
AF273770-1|AAG15119.1|  469|Caenorhabditis elegans nuclear recep...    27   10.0 
AF083224-1|AAD03682.1|  619|Caenorhabditis elegans nuclear recep...    27   10.0 
AF016414-3|AAW88405.1|  329|Caenorhabditis elegans Serpentine re...    27   10.0 

>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score =  118 bits (283), Expect = 3e-27
 Identities = 45/82 (54%), Positives = 66/82 (80%)
 Frame = +2

Query: 254 HCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQD 433
           +C F D LFP S+ +K++K+ + LE +++ N+K++Q  +K +GV+K++P+DKL+KG+FQD
Sbjct: 47  YCLFTDFLFPDSIQLKKVKWNSRLELDWLSNWKLVQTTWKNLGVEKVIPVDKLIKGKFQD 106

Query: 434 NFEFLQWFKKFFDANYGGAAYD 499
           NFEFLQWFKK FDANY G  YD
Sbjct: 107 NFEFLQWFKKLFDANYDGHEYD 128



 Score = 64.1 bits (149), Expect = 5e-11
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = +3

Query: 132 VNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGA 251
           VNVY+T  +++NLSRH+ML WVNDCLQ++F KIE+L TGA
Sbjct: 6   VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTGA 45


>AL031269-2|CAA20332.1|  299|Caenorhabditis elegans Hypothetical
           protein VW02B12L.3 protein.
          Length = 299

 Score = 79.0 bits (186), Expect = 2e-15
 Identities = 32/75 (42%), Positives = 52/75 (69%)
 Frame = +2

Query: 254 HCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQD 433
           +CQ   +LF  ++ +K++KF    E + + N+K+L   +K +G+DK V ++K+ K +FQD
Sbjct: 44  YCQLTHLLF-NAINLKKVKFNPRSEPDVLNNWKVLTTTWKDLGIDKPVDVEKMKKAKFQD 102

Query: 434 NFEFLQWFKKFFDAN 478
           N EFLQWF KF++AN
Sbjct: 103 NMEFLQWFYKFYNAN 117



 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = +3

Query: 126 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAA 254
           M VNV+ + VT++ LSR + +AWVN+ L+S+F K+EE+ +GAA
Sbjct: 1   MVVNVFISAVTTDTLSRKEAVAWVNNLLKSHFTKVEEMASGAA 43


>U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like
           protein family protein20 protein.
          Length = 217

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 499 VICRTSIVGVKEFLEPLQKLKIILETTLHQFVN 401
           +IC      V  FL P++K+++I +T L  FVN
Sbjct: 136 IICTNCQSAVNAFLAPIKKVELITKTELTDFVN 168


>Z82076-1|CAB04934.1|  363|Caenorhabditis elegans Hypothetical
           protein W07G1.2 protein.
          Length = 363

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -1

Query: 481 IVGVKEFLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDS 302
           ++G   +   L    ++ +  L  F +  YL+   +F   + YF +   +   ICLK   
Sbjct: 4   LIGNSSYFRVLTPTTVLHDHRLRGFPDNIYLIVYGIFHLLIMYFVLKCAY---ICLKIRV 60

Query: 301 FHW 293
           FHW
Sbjct: 61  FHW 63


>Z81147-8|CAB03537.1|  338|Caenorhabditis elegans Hypothetical
           protein T09E11.10 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = +2

Query: 266 MDMLFPGSVPMKR-IKFKTNL---EHEYIQNFKILQAGFKK 376
           M M+F G  P K  I F +++   +HEY++ ++I  A FK+
Sbjct: 288 MTMMFMGYEPTKEPILFSSHIPLKDHEYLEQYRIQMADFKE 328


>Z78545-3|CAB01767.1|  306|Caenorhabditis elegans Hypothetical
           protein M03B6.4 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +2

Query: 206 SPVKLCEDRRVVYRCRHCQFMDMLFPGS 289
           SP +LC+D+R+++R +  + M +  PG+
Sbjct: 132 SPKRLCQDKRIIFRNQKIRNMAIHSPGT 159


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -1

Query: 463 FLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLY 338
           F+E L+ LK +L++ LH   N Y+L H  +   S   F +LY
Sbjct: 21  FVE-LRSLKNLLKSILHNIENDYFLAHQKVRLYSSHNFVMLY 61


>AF016661-2|AAB66051.1|  246|Caenorhabditis elegans Hypothetical
           protein F02E11.3 protein.
          Length = 246

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 22/73 (30%), Positives = 31/73 (42%)
 Frame = +3

Query: 138 VYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAIASSWTCCSLAVYQ*KESNLR 317
           +Y+TNVT E+L     L ++N    SNF     +  GAA+          +      +  
Sbjct: 124 IYNTNVTGEHL----WLCFLNSETSSNFCHNNGISDGAALRVKMVLGRRVLGATVNRDSL 179

Query: 318 QIWNMNIYRTLKY 356
           QI    I RTL Y
Sbjct: 180 QIVIQGINRTLSY 192


>Z81062-10|CAB02940.1|   79|Caenorhabditis elegans Hypothetical
           protein F15A4.10 protein.
          Length = 79

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 174 RHDMLAWVNDCLQSNFAKIEELC 242
           R D L W  D LQ N A+ +E+C
Sbjct: 31  RIDALLWEVDTLQKNIAETKEMC 53


>Z68118-8|CAA92189.2|  289|Caenorhabditis elegans Hypothetical
           protein R01E6.7 protein.
          Length = 289

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 215 KLCEDRRVVYRCRHCQFMDMLFPGSV 292
           ++C+ R + +RC H  F+D  F   V
Sbjct: 48  EVCQQREISFRCVHYTFLDECFEARV 73


>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 366 VLKRWVWTR*YPLTNW*RVVSKI 434
           +LK+W+WTR    T W ++ S I
Sbjct: 178 ILKKWIWTRNSRFTVWVQLPSAI 200


>AF303270-1|AAG50228.1|   79|Caenorhabditis elegans 2M776 protein.
          Length = 79

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 174 RHDMLAWVNDCLQSNFAKIEELC 242
           R D L W  D LQ N A+ +E+C
Sbjct: 31  RIDALLWEVDTLQKNIAETKEMC 53


>Z36237-1|CAA85271.2|  619|Caenorhabditis elegans Hypothetical
           protein C48D5.1 protein.
          Length = 619

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 128 GCKCIFYERYVRKSIAA*YASVGE*LSPVKLCEDRRVVYRCRHCQFMDMLFPGSV 292
           GCK  F++R V+K+    Y   G    P+    D+R   RC++C++   L  G V
Sbjct: 287 GCKG-FFKRTVQKNSK--YTCAGNKTCPI----DKRYRSRCQYCRYQKCLEVGMV 334


>U13076-1|AAA96984.1|  463|Caenorhabditis elegans steroid hormone
           receptor familymember CNR8 protein.
          Length = 463

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 128 GCKCIFYERYVRKSIAA*YASVGE*LSPVKLCEDRRVVYRCRHCQFMDMLFPGSV 292
           GCK  F++R V+K+    Y   G    P+    D+R   RC++C++   L  G V
Sbjct: 131 GCKG-FFKRTVQKNSK--YTCAGNKTCPI----DKRYRSRCQYCRYQKCLEVGMV 178


>AY204167-1|AAO39171.1|  619|Caenorhabditis elegans nuclear receptor
           NHR-6 protein.
          Length = 619

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 128 GCKCIFYERYVRKSIAA*YASVGE*LSPVKLCEDRRVVYRCRHCQFMDMLFPGSV 292
           GCK  F++R V+K+    Y   G    P+    D+R   RC++C++   L  G V
Sbjct: 287 GCKG-FFKRTVQKNSK--YTCAGNKTCPI----DKRYRSRCQYCRYQKCLEVGMV 334


>AF273770-1|AAG15119.1|  469|Caenorhabditis elegans nuclear receptor
           NHR-6 protein.
          Length = 469

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 128 GCKCIFYERYVRKSIAA*YASVGE*LSPVKLCEDRRVVYRCRHCQFMDMLFPGSV 292
           GCK  F++R V+K+    Y   G    P+    D+R   RC++C++   L  G V
Sbjct: 137 GCKG-FFKRTVQKNSK--YTCAGNKTCPI----DKRYRSRCQYCRYQKCLEVGMV 184


>AF083224-1|AAD03682.1|  619|Caenorhabditis elegans nuclear receptor
           NHR-6 protein.
          Length = 619

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +2

Query: 128 GCKCIFYERYVRKSIAA*YASVGE*LSPVKLCEDRRVVYRCRHCQFMDMLFPGSV 292
           GCK  F++R V+K+    Y   G    P+    D+R   RC++C++   L  G V
Sbjct: 287 GCKG-FFKRTVQKNSK--YTCAGNKTCPI----DKRYRSRCQYCRYQKCLEVGMV 334


>AF016414-3|AAW88405.1|  329|Caenorhabditis elegans Serpentine
           receptor, class h protein210, isoform b protein.
          Length = 329

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -2

Query: 447 KNSKLSWKRPFTSLSMGTILSTPIFLKPACNILKFCIYSCSKFVLNLIL 301
           KN+    K+ F S+++ T++   I L P C    +C YS  K   N  L
Sbjct: 231 KNTMALQKKFFVSITIQTVIPFFIILVPLC----YCGYSLGKMYYNQAL 275


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,398,974
Number of Sequences: 27780
Number of extensions: 272710
Number of successful extensions: 752
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)