Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0164
         (499 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0599 + 5368091-5368123,5368212-5368383,5369237-5369335,536...    28   4.8  
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28...    28   4.8  

>05_01_0599 +
           5368091-5368123,5368212-5368383,5369237-5369335,
           5369636-5369748,5369824-5369916,5370081-5370244,
           5370328-5370564,5370739-5370883,5370982-5371160,
           5371997-5372142,5372239-5372366,5372441-5372614,
           5372706-5372735,5373219-5373380,5373460-5373705,
           5373733-5373870,5373974-5374174,5374304-5374448,
           5374575-5374681,5374830-5374970,5375274-5375539,
           5375621-5375745,5375843-5376109,5376250-5376263
          Length = 1174

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 320 SSMKSKIDSF*SFLNSWSERGRERTAXLTSCTVCLVKSSAWLEFTK 183
           SS+  K+  +   L ++ + GR  T  + SC VC++ +  W  F K
Sbjct: 791 SSLFEKLYYYLVVLPTYQKEGRSTT--ILSCRVCVITAEMWCLFKK 834


>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
            282768-282923,283224-283349,283426-283560,283815-283942,
            284037-284148,284233-284547,284655-284771,284871-285166,
            285252-285783,287980-288082,288808-288881,288965-289062,
            289340-289380,289977-290032,290170-290244,290377-290469,
            290602-290850,290930-291002,291681-291766,291853-291938,
            292067-292142,292280-292347,292430-292496,292570-292665,
            292741-292843,293214-293309,293396-293466
          Length = 2047

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +2

Query: 377  DVPGLRRVRESGHHERHSLDLFFHAASXSAPTRQXA 484
            D+  LR +R++  ++R +L  +F AAS S PT+  A
Sbjct: 1508 DLHELRTLRDALDYDRSALVRYFSAASASFPTKGGA 1543


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,909,140
Number of Sequences: 37544
Number of extensions: 172192
Number of successful extensions: 433
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)