Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0162
(399 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochr... 101 4e-21
UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep: Cytoc... 90 1e-17
UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep: Cyt... 87 2e-16
UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep: C... 85 4e-16
UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochr... 85 4e-16
UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:... 84 8e-16
UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep: Cyto... 81 6e-15
UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI... 80 1e-14
UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep: Cyto... 77 2e-13
UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precurs... 73 3e-12
UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1; Sa... 73 3e-12
UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4; Sa... 73 3e-12
UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep: Cytoch... 71 8e-12
UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep... 69 3e-11
UniRef50_P05418 Cluster: Cytochrome b; n=11; Alphaproteobacteria... 67 1e-10
UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochr... 67 1e-10
UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa group... 67 1e-10
UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella geronimensi... 66 2e-10
UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI ... 66 2e-10
UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa group|... 66 3e-10
UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep: Cyto... 65 4e-10
UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|R... 65 6e-10
UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Re... 64 1e-09
UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea jecorina... 64 1e-09
UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:... 63 2e-09
UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9; Sabanejewia|... 62 3e-09
UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep: C... 62 3e-09
UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochr... 62 4e-09
UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep: Cytoch... 62 4e-09
UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep: Cyt... 62 4e-09
UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidenta... 61 9e-09
UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates reticula... 60 1e-08
UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep: Cyt... 60 1e-08
UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep: Cyt... 60 1e-08
UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Re... 60 2e-08
UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b... 59 4e-08
UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep: Cy... 58 5e-08
UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep: Cyt... 57 1e-07
UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 56 2e-07
UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep: Cyt... 56 2e-07
UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular organisms... 56 3e-07
UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4; Pectinidae... 56 3e-07
UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:... 54 1e-06
UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep: ... 53 2e-06
UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Re... 50 1e-05
UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep... 50 2e-05
UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep: C... 50 2e-05
UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas mo... 49 4e-05
UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene... 48 5e-05
UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep: ... 48 5e-05
UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular organism... 47 1e-04
UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262; ... 46 2e-04
UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase, ... 46 2e-04
UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella spira... 46 2e-04
UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase cytoc... 46 3e-04
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 46 4e-04
UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|R... 46 4e-04
UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis ... 44 0.001
UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase cytoch... 44 0.001
UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep: Cyto... 43 0.003
UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne javanica... 43 0.003
UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep: Cy... 42 0.004
UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium gallinace... 42 0.004
UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep: Cyt... 42 0.006
UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase, ... 41 0.008
UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides poly... 41 0.008
UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Re... 41 0.010
UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2; Desulfitobac... 38 0.055
UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus russelli... 38 0.072
UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b subu... 38 0.096
UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema americanum... 37 0.13
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 37 0.17
UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2; Rubr... 36 0.22
UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:... 36 0.39
UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase cytoc... 35 0.51
UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep: ... 35 0.51
UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC 1.... 35 0.67
UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1; ... 35 0.67
UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;... 33 1.6
UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1... 33 2.7
UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium falcipar... 33 2.7
UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5; Su... 33 2.7
UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris ... 32 3.6
UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep... 32 3.6
UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6... 32 4.8
UniRef50_Q05FV0 Cluster: Putative uncharacterized protein; n=1; ... 31 6.3
UniRef50_Q1DZA5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.3
UniRef50_A0H4A6 Cluster: Adenylyl cyclase class-3/4/guanylyl cyc... 31 8.3
UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep: C... 31 8.3
>UniRef50_P18935 Cluster: Cytochrome b; n=3382; root|Rep: Cytochrome
b - Drosophila melanogaster (Fruit fly)
Length = 378
Score = 101 bits (243), Expect = 4e-21
Identities = 49/91 (53%), Positives = 61/91 (67%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
+HP+FKI NN LCLIIQI+TGLFL ++YTA+I +AFY V
Sbjct: 8 SHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSV 67
Query: 181 NYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
N+ICR+VNYG ++RTLHANGASFF F IY+
Sbjct: 68 NHICRDVNYGWLLRTLHANGASFF-FICIYL 97
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FFICIYLH+GRGIYY S+ L YVLP GQ+S
Sbjct: 91 FFICIYLHVGRGIYYGSYKFTPTWLIGVIILFLVMGTAFMGYVLPWGQMS 140
>UniRef50_A0EXD5 Cluster: Cytochrome b; n=21; Otophysi|Rep:
Cytochrome b - Clarias liocephalus
Length = 373
Score = 90.2 bits (214), Expect = 1e-17
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
THP+FKI+N+ LCL +QI+TGLFL ++YT++I AF V
Sbjct: 3 THPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSSV 62
Query: 181 NYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+ICR+VNYG IIR LHANGASFF F IY+
Sbjct: 63 VHICRDVNYGWIIRNLHANGASFF-FICIYL 92
Score = 90.2 bits (214), Expect = 1e-17
Identities = 45/91 (49%), Positives = 57/91 (62%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
THP+FKI+N+ LCL +QI+TGLFL ++YT++I AF V
Sbjct: 190 THPLFKIVNDALIDLPTPSNISTWWNFGSLMLLCLAVQILTGLFLAMHYTSDISTAFSSV 249
Query: 181 NYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+ICR+VNYG IIR LHANGASFF F IY+
Sbjct: 250 VHICRDVNYGWIIRNLHANGASFF-FICIYL 279
Score = 44.8 bits (101), Expect = 6e-04
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FFICIYLHIGRG+YY S+ K YVLP GQ+S
Sbjct: 86 FFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMS 135
Score = 44.8 bits (101), Expect = 6e-04
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FFICIYLHIGRG+YY S+ K YVLP GQ+S
Sbjct: 273 FFICIYLHIGRGLYYGSYMYKETWNIGVVLLLLVMMTAFVGYVLPWGQMS 322
>UniRef50_O78784 Cluster: Cytochrome b; n=653; Coelomata|Rep:
Cytochrome b - Capra sibirica (Siberian ibex)
Length = 380
Score = 86.6 bits (205), Expect = 2e-16
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
THP+ KI+NN +CLI+QI+TGLFL ++YT++ AF V
Sbjct: 7 THPLMKIVNNTFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSV 66
Query: 181 NYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+ICR+VNYG IIR +HANGAS FF+ F++I
Sbjct: 67 THICRDVNYGWIIRYMHANGASMFFICLFMHI 98
Score = 40.3 bits (90), Expect = 0.014
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFIC+++HIGRG+YY S+ YVLP GQ+S
Sbjct: 89 MFFICLFMHIGRGLYYGSYTFLETWNIGVLLLFTTMATAFMGYVLPWGQMS 139
>UniRef50_O47901 Cluster: Cytochrome b; n=17; Euteleostomi|Rep:
Cytochrome b - Leuciscus carolitertii
Length = 345
Score = 85.4 bits (202), Expect = 4e-16
Identities = 43/91 (47%), Positives = 55/91 (60%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
THP+ KI N LCLI QI+TGLFL ++YT++I AF V
Sbjct: 7 THPLMKIANATLVDLPTPSNISALWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSV 66
Query: 181 NYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+ICR+VNYG +IR+LHANGASFF F +Y+
Sbjct: 67 THICRDVNYGWLIRSLHANGASFF-FICLYM 96
Score = 40.3 bits (90), Expect = 0.014
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FFIC+Y+HI RG+YY S+ K YVLP GQ+S
Sbjct: 90 FFICLYMHIARGLYYGSYLYKETWNIGVVLFLLVMMTAFVGYVLPWGQMS 139
>UniRef50_Q8WCJ7 Cluster: Cytochrome b; n=2933; root|Rep: Cytochrome
b - Cryptotis parva (Least shrew)
Length = 379
Score = 85.4 bits (202), Expect = 4e-16
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
THP+ KIIN+ +CLIIQI+TGLFL ++YT++ AF V
Sbjct: 7 THPLMKIINSSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSV 66
Query: 181 NYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+ICR+VNYG +IR LHANGAS FF+ F+++
Sbjct: 67 THICRDVNYGWLIRYLHANGASMFFICLFLHV 98
Score = 40.3 bits (90), Expect = 0.014
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFIC++LH+GRG+YY S+ YVLP GQ+S
Sbjct: 89 MFFICLFLHVGRGLYYGSYMFMETWNIGVLLLFAVMATAFMGYVLPWGQMS 139
>UniRef50_A1BQ48 Cluster: Cytochrome b; n=105; Clupeocephala|Rep:
Cytochrome b - Priapella chamulae
Length = 256
Score = 84.2 bits (199), Expect = 8e-16
Identities = 42/90 (46%), Positives = 54/90 (60%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
+HP+ KI N+ LCLI QI+TGLFL ++YT++I AF V
Sbjct: 7 SHPLLKIANDALVDLPAPINISAWWNFGSLLGLCLIAQILTGLFLAMHYTSDISTAFSSV 66
Query: 181 NYICRNVNYG*IIRTLHANGASFFLFAFIY 270
+ICR+VNYG +IR +HANGASFF F IY
Sbjct: 67 THICRDVNYGWLIRNMHANGASFF-FICIY 95
Score = 39.1 bits (87), Expect = 0.031
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLK 311
FFICIY HIGRG+YY S+ K
Sbjct: 90 FFICIYFHIGRGLYYGSYLYK 110
>UniRef50_Q3YFJ1 Cluster: Cytochrome b; n=27; Coelomata|Rep:
Cytochrome b - Laonastes aenigmamus (Laotian rock rat)
Length = 378
Score = 81.4 bits (192), Expect = 6e-15
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
+HP+ KIIN+ +CL++QIITGLFL ++YTA+ AF +
Sbjct: 7 SHPLMKIINHSFIDLPAPSNFYSWWNFGSLLGVCLLLQIITGLFLAMHYTADTTSAFSSI 66
Query: 181 NYICRNVNYG*IIRTLHANGAS-FFLFAFIYIS 276
+ICR+VNYG +IR HANGAS FF+ +I+I+
Sbjct: 67 AHICRDVNYGWVIRYTHANGASMFFICLYIHIA 99
Score = 37.5 bits (83), Expect = 0.096
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLK 311
+FFIC+Y+HI RG+YY S+ K
Sbjct: 89 MFFICLYIHIARGLYYGSYLFK 110
>UniRef50_Q0H8X2 Cluster: Probable intron-encoded endonuclease bI1
precursor [Contains: Truncated non-functional cytochrome
b; Intron-encoded endonuclease bI1 (EC 3.1.-.-)]; n=2;
Ustilago maydis|Rep: Probable intron-encoded
endonuclease bI1 precursor [Contains: Truncated
non-functional cytochrome b; Intron-encoded endonuclease
bI1 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus)
Length = 410
Score = 80.2 bits (189), Expect = 1e-14
Identities = 39/91 (42%), Positives = 55/91 (60%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
THPI + N+ +CLIIQI+TG+FL ++YT ++++AF V
Sbjct: 6 THPILGLANSYLIDSPQPSNISYMWNFGSLLGVCLIIQILTGVFLAMHYTPSVDLAFISV 65
Query: 181 NYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+I R+VNYG +IR LHAN ASFF F F+Y+
Sbjct: 66 EHIMRDVNYGWLIRYLHANTASFF-FIFVYL 95
Score = 35.5 bits (78), Expect = 0.39
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESF 302
FFI +YLHIGRG+YY S+
Sbjct: 89 FFIFVYLHIGRGLYYGSY 106
>UniRef50_Q94NM9 Cluster: Cytochrome b; n=4; Cricetidae|Rep:
Cytochrome b - Lemmus lemmus (Norway lemming)
Length = 211
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/60 (58%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
LCLIIQI+TGLFL ++YT++ AF V +ICR+VNYG +IR +HANGAS FF+ F+++
Sbjct: 20 LCLIIQILTGLFLAMHYTSDTATAFSSVAHICRDVNYGWLIRYMHANGASMFFICLFLHV 79
Score = 41.5 bits (93), Expect = 0.006
Identities = 13/21 (61%), Positives = 20/21 (95%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNL 308
+FFIC++LH+GRG+YY S+N+
Sbjct: 70 MFFICLFLHVGRGVYYGSYNM 90
>UniRef50_P03879 Cluster: Intron-encoded RNA maturase bI4 precursor
(RNA maturase SCbI4) [Contains: Truncated, nonfunctional
cytochrome b; RNA maturase bI4 (EC 3.1.-.-)]; n=18;
Fungi/Metazoa group|Rep: Intron-encoded RNA maturase bI4
precursor (RNA maturase SCbI4) [Contains: Truncated,
nonfunctional cytochrome b; RNA maturase bI4 (EC
3.1.-.-)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 638
Score = 72.5 bits (170), Expect = 3e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 252
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_Q9ZZW7 Cluster: Cytochrome b mRNA maturase bI3; n=1;
Saccharomyces cerevisiae|Rep: Cytochrome b mRNA maturase
bI3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 517
Score = 72.5 bits (170), Expect = 3e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 252
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_P03873 Cluster: Cytochrome b mRNA maturase bI2; n=4;
Saccharomycetales|Rep: Cytochrome b mRNA maturase bI2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 423
Score = 72.5 bits (170), Expect = 3e-12
Identities = 31/52 (59%), Positives = 44/52 (84%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFF 252
LCL+IQI+TG+F+ ++Y++NIE+AF V +I R+V+ G I+R LHANGASFF
Sbjct: 38 LCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFF 89
>UniRef50_P00156 Cluster: Cytochrome b; n=22548; root|Rep:
Cytochrome b - Homo sapiens (Human)
Length = 380
Score = 70.9 bits (166), Expect = 8e-12
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 4 HPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRVN 183
+P+ K+IN+ CLI+QI TGLFL ++Y+ + AF +
Sbjct: 8 NPLMKLINHSFIDLPTPSNISAWWNFGSLLGACLILQITTGLFLAMHYSPDASTAFSSIA 67
Query: 184 YICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+I R+VNYG IIR LHANGAS FF+ F++I
Sbjct: 68 HITRDVNYGWIIRYLHANGASMFFICLFLHI 98
Score = 41.5 bits (93), Expect = 0.006
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFIC++LHIGRG+YY SF YVLP GQ+S
Sbjct: 89 MFFICLFLHIGRGLYYGSFLYSETWNIGIILLLATMATAFMGYVLPWGQMS 139
>UniRef50_Q02761 Cluster: Cytochrome b; n=15; Rhodobacterales|Rep:
Cytochrome b - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 445
Score = 69.3 bits (162), Expect = 3e-11
Identities = 30/61 (49%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +1
Query: 94 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIY 270
A CL++QI+TG+ L ++YT ++++AF V +I RNVN G ++R LHANGAS FF+ +++
Sbjct: 52 AFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLH 111
Query: 271 I 273
I
Sbjct: 112 I 112
Score = 34.3 bits (75), Expect = 0.89
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFI +YLHI RG+YY S+ + + YVLP GQ+S
Sbjct: 103 LFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMS 155
>UniRef50_P05418 Cluster: Cytochrome b; n=11;
Alphaproteobacteria|Rep: Cytochrome b - Paracoccus
denitrificans
Length = 440
Score = 67.3 bits (157), Expect = 1e-10
Identities = 31/61 (50%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 94 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIY 270
A CL++QI TG+ L ++YT ++++AF V +I R+VN G ++R LHANGAS FFL +I+
Sbjct: 52 AFCLVLQIATGIVLVMHYTPHVDLAFASVEHIMRDVNGGYMLRYLHANGASLFFLAVYIH 111
Query: 271 I 273
I
Sbjct: 112 I 112
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FF+ +Y+HI RG+YY S+ + + YVLP GQ+S
Sbjct: 103 LFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMS 155
>UniRef50_P42792 Cluster: Cytochrome b; n=6041; root|Rep: Cytochrome
b - Arabidopsis thaliana (Mouse-ear cress)
Length = 393
Score = 67.3 bits (157), Expect = 1e-10
Identities = 28/60 (46%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+CL+IQI+TG+FL ++YT ++++AF V +I R+V G ++R +HANGAS FF+ +++I
Sbjct: 44 ICLVIQIVTGVFLAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFFIVVYLHI 103
Score = 35.9 bits (79), Expect = 0.29
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFN--LKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFI +YLHI RG+YY S++ ++V YVLP GQ+S
Sbjct: 94 MFFIVVYLHIFRGLYYASYSSPREFVWCLGVVIFLLMIVTAFIGYVLPWGQMS 146
>UniRef50_Q2I6Z5 Cluster: Cytochrome b; n=41; Fungi/Metazoa
group|Rep: Cytochrome b - Lottia digitalis (California
fingered limpet)
Length = 389
Score = 66.9 bits (156), Expect = 1e-10
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLF 258
LCLI+Q+I+GLFL+ +Y+A+ AF V +I RNVN+G ++R++HANGAS F F
Sbjct: 43 LCLIMQLISGLFLSFHYSAHESTAFEAVVHIERNVNFGWLLRSIHANGASAFFF 96
Score = 40.3 bits (90), Expect = 0.014
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FF C+Y HIGRG+YY + + V L YVLP GQ+S
Sbjct: 94 FFFCMYAHIGRGLYYGCYCQRKVWLSGVVLFLITMGIAFLGYVLPWGQMS 143
>UniRef50_Q9TAE6 Cluster: Cytochrome b; n=1; Anniella
geronimensis|Rep: Cytochrome b - Anniella geronimensis
Length = 262
Score = 66.5 bits (155), Expect = 2e-10
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1
Query: 112 QIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
QIITG+FL ++YT +I +AF V +ICR+V YG ++R LH NGAS F F IY+
Sbjct: 1 QIITGIFLAMHYTPHISLAFSSVAHICRDVQYGWLLRNLHTNGASMFFFC-IYL 53
Score = 45.6 bits (103), Expect = 4e-04
Identities = 23/51 (45%), Positives = 26/51 (50%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FF CIYLHIGRG+YY S LK YVLP GQ+S
Sbjct: 46 MFFFCIYLHIGRGLYYGSHTLKKTWYTGTMLLLMLMATAFLGYVLPWGQMS 96
>UniRef50_P03880 Cluster: Intron-encoded DNA endonuclease I-AniI
precursor (mRNA maturase bI1) (COB intron protein)
[Contains: Truncated non-functional cytochrome b; DNA
endonuclease/RNA maturase I-AniI (EC 3.1.-.-)]; n=23;
Fungi/Metazoa group|Rep: Intron-encoded DNA endonuclease
I-AniI precursor (mRNA maturase bI1) (COB intron
protein) [Contains: Truncated non-functional cytochrome
b; DNA endonuclease/RNA maturase I-AniI (EC 3.1.-.-)] -
Emericella nidulans (Aspergillus nidulans)
Length = 488
Score = 66.5 bits (155), Expect = 2e-10
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
+HP+ KI+N+ ALCL IQI+TG+ L ++YT ++ AF V
Sbjct: 6 SHPLLKIVNSYIIDSPQPANLSYLWNFGSLLALCLGIQIVTGVTLAMHYTPSVSEAFNSV 65
Query: 181 NYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+I R+VN G ++R LH+N AS FF +++I
Sbjct: 66 EHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
Score = 34.3 bits (75), Expect = 0.89
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESF 302
FF +YLHIGRG+YY S+
Sbjct: 89 FFFLVYLHIGRGLYYGSY 106
>UniRef50_Q35127 Cluster: Cytochrome b; n=7; Fungi/Metazoa
group|Rep: Cytochrome b - Neurospora crassa
Length = 448
Score = 65.7 bits (153), Expect = 3e-10
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
+HP+ K++N+ A CLIIQI+TG+ L ++Y+ N+ AF +
Sbjct: 6 SHPLLKLVNSYLIDASQPSNISYLWNFGSLLACCLIIQIVTGVTLAMHYSPNVLEAFNSI 65
Query: 181 NYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+I R+VN G ++R LH+N AS FF +++I
Sbjct: 66 EHIMRDVNNGWLVRYLHSNTASAFFFLVYLHI 97
Score = 33.9 bits (74), Expect = 1.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESF 302
FF +YLHIGRG+YY S+
Sbjct: 89 FFFLVYLHIGRGMYYGSY 106
>UniRef50_Q8WF54 Cluster: Cytochrome b; n=23; Eukaryota|Rep:
Cytochrome b - Venerupis (Ruditapes) philippinarum
Length = 440
Score = 65.3 bits (152), Expect = 4e-10
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+CL+ QIITGL + ++YT + +AF V +I R+VN G +R LHANGAS FF+ +++I
Sbjct: 50 MCLVSQIITGLLMAVHYTPEVNLAFSSVVHIMRDVNGGWFVRNLHANGASAFFMLIYLHI 109
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FF+ IYLHIGRG+YY SF++K L YVLP GQ+S
Sbjct: 101 FFMLIYLHIGRGVYYHSFHMKKTWLVGCIIFTMLMVTAFTGYVLPWGQMS 150
>UniRef50_Q76F81 Cluster: Cytochrome b protein; n=12; Coelomata|Rep:
Cytochrome b protein - Ornithodoros porcinus
Length = 365
Score = 64.9 bits (151), Expect = 6e-10
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = +1
Query: 100 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
CL IQI TG+FL ++++++I +AF +++I R+VN G +IR HAN ASFF F F+YI
Sbjct: 37 CLAIQISTGIFLAMHFSSDISLAFSSISHIMRDVNMGWMIRMAHANTASFF-FIFLYI 93
Score = 39.1 bits (87), Expect = 0.031
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FFI +Y+HI RG+Y+ SF LK + YVLP GQ+S
Sbjct: 87 FFIFLYIHIARGLYFSSFILKGPWMSGVTIIFTLMATAFLGYVLPWGQMS 136
>UniRef50_A6YHJ9 Cluster: Apocytochrome b; n=2; Hexasterophora|Rep:
Apocytochrome b - Iphiteon panicea
Length = 397
Score = 64.1 bits (149), Expect = 1e-09
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
LCLIIQ+ITG+ L ++Y I +F + + RNV++G I R LHANGAS FFL +++I
Sbjct: 46 LCLIIQLITGILLAMHYCPEINNSFNTIAHTIRNVSWGHITRNLHANGASIFFLCVYLHI 105
Query: 274 S 276
S
Sbjct: 106 S 106
Score = 38.7 bits (86), Expect = 0.041
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
IFF+C+YLHI R IY+ ++ K YVLP GQ+S
Sbjct: 96 IFFLCVYLHISRNIYHNTWKNKTTWTLGITIYLLMIITAFMGYVLPWGQMS 146
>UniRef50_Q8SHP6 Cluster: Apocytochrome B; n=1; Hypocrea
jecorina|Rep: Apocytochrome B - Trichoderma reesei
(Hypocrea jecorina)
Length = 427
Score = 64.1 bits (149), Expect = 1e-09
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
+HP+ K++N A+CLIIQI+TG+ L ++Y ++ AF +
Sbjct: 6 SHPLLKLVNMYIIDHSQPSNISYLWNFGSLLAVCLIIQIVTGVTLAMHYNPSVAEAFNSI 65
Query: 181 NYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+I R+VN G +IR LH+N AS FF +++I
Sbjct: 66 EHIMRDVNNGWLIRYLHSNTASAFFFLVYLHI 97
Score = 34.7 bits (76), Expect = 0.67
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESF 302
FF +YLHIGRG+YY S+
Sbjct: 89 FFFLVYLHIGRGLYYASY 106
>UniRef50_Q5W910 Cluster: Cytochrome b; n=1; Lingula anatina|Rep:
Cytochrome b - Lingula unguis
Length = 418
Score = 62.9 bits (146), Expect = 2e-09
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
L L+ QII+G FL+ +Y A+++ AF + +I R+VNYG +IR H NGAS F F F+YI
Sbjct: 37 LMLVCQIISGFFLSTHYVAHVDYAFDSIVHINRDVNYGALIRGFHINGASMFFF-FMYI 94
Score = 35.9 bits (79), Expect = 0.29
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FF +Y+HIGRGIYY + V YVLP GQ+S
Sbjct: 87 MFFFFMYIHIGRGIYYGCYRQAGVWYTGIILMLLLMATSFLGYVLPWGQMS 137
>UniRef50_Q8W9D9 Cluster: Cytochrome-b protein; n=9;
Sabanejewia|Rep: Cytochrome-b protein - Sabanejewia
balcanica
Length = 81
Score = 62.5 bits (145), Expect = 3e-09
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = -2
Query: 254 KKNEAPLACNVRIIQP*FTFRQI*FTL*KAISIFAV*YIVKNNPVXXXXIRHKASRDPIF 75
KKN+APL +R+ P FT RQ+ T KA+ + V + KN+PV I+HK S +P F
Sbjct: 3 KKNDAPLPWMLRMSHPYFTSRQMWATEEKAVVMSDVYCMAKNSPVWIWVIKHKPSNEPKF 62
Query: 74 HQEEILDGLGKSINELLMI 18
H E+L+G GKS + L I
Sbjct: 63 HHTEMLEGAGKSTSASLSI 81
>UniRef50_P24890 Cluster: Cytochrome b; n=210; Chromadorea|Rep:
Cytochrome b - Caenorhabditis elegans
Length = 370
Score = 62.5 bits (145), Expect = 3e-09
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+ LI QI+TG FL YYT + +AF V YI VN+G + R H NGAS FF+F +++I
Sbjct: 36 MVLIFQILTGTFLAFYYTPDSLMAFSTVQYIMYEVNFGWVFRIFHFNGASLFFIFLYLHI 95
Query: 274 SDEXFTMN 297
F M+
Sbjct: 96 FKGLFFMS 103
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFI +YLHI +G+++ S+ LK V + YVL Q+S
Sbjct: 86 LFFIFLYLHIFKGLFFMSYRLKKVWMSGLTIYLLVMMEAFMGYVLVWAQMS 136
>UniRef50_P23134 Cluster: Cytochrome b; n=8595; root|Rep: Cytochrome
b - Rhodospirillum rubrum
Length = 405
Score = 62.1 bits (144), Expect = 4e-09
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+ +II I TG+FL + YTA+++ AF V I R+VNYG ++R +HANGAS F F +Y+
Sbjct: 50 IAMIIMIATGIFLAMSYTAHVDHAFDSVERIMRDVNYGWLMRYMHANGASMF-FIVVYV 107
>UniRef50_Q00228 Cluster: Cytochrome b; n=19; Mytilus|Rep:
Cytochrome b - Mytilus edulis (Blue mussel)
Length = 397
Score = 62.1 bits (144), Expect = 4e-09
Identities = 33/90 (36%), Positives = 51/90 (56%)
Frame = +1
Query: 1 THPIFKIINNXXXXXXXXXXXXXXXXXXXXXALCLIIQIITGLFLTIYYTANIEIAFYRV 180
T+ + KI+N+ LCL+IQ+++GL L+ +YTA+ ++AF V
Sbjct: 22 TNKLVKIMNDSFYDLPCPVNLNAWWSFGSMLGLCLVIQLLSGLLLSAHYTAHEDMAFDSV 81
Query: 181 NYICRNVNYG*IIRTLHANGASFFLFAFIY 270
+I RNV G ++R +HANG+S F F IY
Sbjct: 82 VHIMRNVEKGWMLRNIHANGSSMF-FICIY 110
Score = 41.5 bits (93), Expect = 0.006
Identities = 24/59 (40%), Positives = 28/59 (47%)
Frame = +3
Query: 222 NITC*WSFIFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
NI S +FFICIY HI RG+YY S+ K V Y LP GQ+S
Sbjct: 96 NIHANGSSMFFICIYAHIARGLYYGSYLDKTVWYFGVHLFLLTMAEAFLGYTLPWGQMS 154
>UniRef50_O48101 Cluster: Cytochrome b; n=110; Serpentes|Rep:
Cytochrome b - Micrurus fulvius microgalbineus (Mexican
coral snake)
Length = 371
Score = 62.1 bits (144), Expect = 4e-09
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Frame = +1
Query: 100 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYIS 276
CL++Q++TG FL I+YTANI +AF V +I R+V G I++ HA GAS FF+ +I+I+
Sbjct: 32 CLMLQVLTGFFLAIHYTANINLAFSSVVHITRDVPCGWIMQNTHAIGASLFFICIYIHIA 91
Score = 43.2 bits (97), Expect = 0.002
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFICIY+HI RG+YY + K V L YVLP GQ+S
Sbjct: 81 LFFICIYIHIARGLYYGLYLNKNVWLSGVTLLMTLMATAFFGYVLPWGQMS 131
>UniRef50_Q2HJL4 Cluster: Cytochrome b; n=1; Campanulotes bidentatus
compar|Rep: Cytochrome b - Campanulotes bidentatus
compar (small pigeon louse)
Length = 374
Score = 60.9 bits (141), Expect = 9e-09
Identities = 27/59 (45%), Positives = 44/59 (74%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+CL+IQ+++G+FL+ +Y+ IE AF V I +V +G + R++HANGASFF F ++Y+
Sbjct: 44 VCLMIQLVSGIFLSFHYSPTIEEAFSSVVMIVDDVPFGWMFRSIHANGASFFFF-WVYL 101
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQI 395
FF +YLHIGRG+Y + L V + YV P GQI
Sbjct: 95 FFFWVYLHIGRGLYLSKYKLNPVWMKGVLIFFFLMGTAFMGYVPPWGQI 143
>UniRef50_Q85PH8 Cluster: Cytochrome b; n=1; Dendrobates
reticulatus|Rep: Cytochrome b - Dendrobates reticulatus
(redback poison frog)
Length = 109
Score = 60.5 bits (140), Expect = 1e-08
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 20/79 (25%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAF--------------------YRVNYICRNVNYG*I 216
LCLI QIITGLFL ++YTA+ +AF V +ICR+VNYG +
Sbjct: 3 LCLIAQIITGLFLAMHYTADTSMAFSSIAHICRDVNNGWLLRSLLSSVAHICRDVNYGWL 62
Query: 217 IRTLHANGASFFLFAFIYI 273
+R LHANGASFF F IY+
Sbjct: 63 LRNLHANGASFF-FICIYL 80
Score = 41.1 bits (92), Expect = 0.008
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESF 302
FFICIYLHIGRG+YY SF
Sbjct: 74 FFICIYLHIGRGMYYGSF 91
>UniRef50_Q8HN51 Cluster: Cytochrome b; n=4; Chromadorea|Rep:
Cytochrome b - Brugia malayi (Filarial nematode worm)
Length = 362
Score = 60.5 bits (140), Expect = 1e-08
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+ L+ QIITG FLT YYTA AF V YI VN G ++R +H+NGAS FFLF +++I
Sbjct: 30 IMLMSQIITGFFLTFYYTAGD--AFSSVQYIMFEVNLGWLVRIMHSNGASMFFLFIYLHI 87
>UniRef50_Q950S3 Cluster: Cytochrome b; n=144; Eukaryota|Rep:
Cytochrome b - Spizellomyces punctatus
Length = 396
Score = 60.5 bits (140), Expect = 1e-08
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = +1
Query: 103 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
L+I II+GL L ++YT N +AF V +I R+VN G ++R +HANGASFF F ++Y+
Sbjct: 40 LVILIISGLTLAMHYTPNTLLAFSSVEHIMRDVNNGWLLRYIHANGASFF-FIWVYL 95
Score = 33.1 bits (72), Expect = 2.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESF 302
FFI +YLHIGR +YY S+
Sbjct: 89 FFIWVYLHIGRNLYYGSY 106
>UniRef50_A1C1A8 Cluster: Apocytochrome b; n=88; Magnoliophyta|Rep:
Apocytochrome b - Doryphora sassafras
Length = 347
Score = 59.7 bits (138), Expect = 2e-08
Identities = 24/53 (45%), Positives = 41/53 (77%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 255
+ L+IQI+TG+FL +++T ++++AF V ++ R+V G ++R +HANGAS FL
Sbjct: 30 ISLVIQIVTGVFLAMHHTPHVDLAFNSVEHVMRDVEGGWLLRYMHANGASMFL 82
>UniRef50_P51131 Cluster: Cytochrome b/c1 [Contains: Cytochrome b;
Cytochrome c1]; n=2697; root|Rep: Cytochrome b/c1
[Contains: Cytochrome b; Cytochrome c1] - Bradyrhizobium
japonicum
Length = 687
Score = 58.8 bits (136), Expect = 4e-08
Identities = 26/55 (47%), Positives = 40/55 (72%)
Frame = +1
Query: 109 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+QI+TG+ L ++YT + ++AF V I R+VNYG ++R +HA GAS F FA +Y+
Sbjct: 56 MQILTGVILAMHYTPHADLAFKSVELIVRDVNYGWLLRNMHACGASMFFFA-VYV 109
>UniRef50_Q8M4X4 Cluster: Cytochrome b; n=76; Dinophyceae|Rep:
Cytochrome b - Pfiesteria piscicida
Length = 374
Score = 58.4 bits (135), Expect = 5e-08
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 273
+ +I+QIITG+ L ++YT+++ A++ + ++ R V YG +R H++GASF FLF F+++
Sbjct: 46 VAIILQIITGILLALHYTSDLNSAYFSLFFLIREVFYGWCLRYFHSSGASFVFLFLFLHL 105
Query: 274 SDEXF 288
F
Sbjct: 106 GRAMF 110
>UniRef50_A4Z9W1 Cluster: Cytochrome b; n=9; Colubroidea|Rep:
Cytochrome b - Hemirhagerrhis hildebrandtii
Length = 366
Score = 57.2 bits (132), Expect = 1e-07
Identities = 28/57 (49%), Positives = 39/57 (68%)
Frame = +1
Query: 100 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 270
CL +Q+ TG FL I+YTA++ +AF V +I R+V YG +++ HA GAS F F IY
Sbjct: 32 CLALQMTTGFFLAIHYTADVNLAFSSVVHIMRDVPYGWMMQNTHAIGASLF-FICIY 87
Score = 44.8 bits (101), Expect = 6e-04
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+FFICIY HI RG+YY S+ K V L YVLP GQ+S
Sbjct: 81 LFFICIYTHIARGLYYGSYMNKEVWLSGTTLLIILMATAFFGYVLPWGQMS 131
>UniRef50_A1W459 Cluster: Cytochrome b/b6, N-terminal domain; n=64;
cellular organisms|Rep: Cytochrome b/b6, N-terminal
domain - Acidovorax sp. (strain JS42)
Length = 473
Score = 56.4 bits (130), Expect = 2e-07
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
L L+IQI+TG+FL ++Y + AF V YI R+V +G +IR +H+ GAS F F +Y+
Sbjct: 60 LVLVIQIVTGIFLVMHYKPDAAKAFESVEYIMRDVPWGWLIRYMHSTGASAF-FVVVYL 117
>UniRef50_Q4KRX9 Cluster: Cytochrome b; n=3; Crassostrea|Rep:
Cytochrome b - Crassostrea virginica (Eastern oyster)
Length = 403
Score = 56.4 bits (130), Expect = 2e-07
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 270
L L QI++GL LT+ YTA+ +A ++Y+ R+ NYG IIR+LH GAS F FA Y
Sbjct: 40 LILGSQILSGLILTMNYTADESLAVVSIDYMMRDANYGWIIRSLHMGGASLF-FALTY 96
>UniRef50_O31215 Cluster: Cytochrome b; n=132; cellular
organisms|Rep: Cytochrome b - Chromatium vinosum
(Allochromatium vinosum)
Length = 411
Score = 56.0 bits (129), Expect = 3e-07
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
L L+IQI+TG++L + Y + +AF V YI R+V++G +IR +H+ GAS F F IY+
Sbjct: 47 LTLVIQIVTGVWLAMSYKPDAGLAFASVEYIMRDVDWGWLIRYMHSTGASMF-FIVIYL 104
>UniRef50_Q4FE09 Cluster: Cytochrome b apoenzyme; n=4;
Pectinidae|Rep: Cytochrome b apoenzyme - Placopecten
magellanicus (Sea scallop)
Length = 395
Score = 55.6 bits (128), Expect = 3e-07
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +1
Query: 100 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
CL+ QI+TG FL+ YYTA+ ++AF V++I + V+ G +R+ H N A+F L IY+
Sbjct: 41 CLVSQILTGWFLSFYYTAHEDLAFSSVSFIMKEVSMGWAMRSFHINVANFML-GCIYV 97
Score = 39.5 bits (88), Expect = 0.024
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +3
Query: 258 CIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
CIY+HIGRG+YY SF L V YVLP GQ++
Sbjct: 94 CIYVHIGRGLYYGSFRLYKVWASGIILLVLVMLAAFTGYVLPWGQMA 140
>UniRef50_Q9BGI6 Cluster: Cytochrome b; n=1; Elephas maximus|Rep:
Cytochrome b - Elephas maximus (Indian elephant)
Length = 102
Score = 54.0 bits (124), Expect = 1e-06
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 100 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRT 225
CL+ QI+TGLFL I Y + AF +++ICR+VNYG IIRT
Sbjct: 8 CLVAQILTGLFLAIRYAPDTITAFSSISHICRDVNYGWIIRT 49
Score = 33.1 bits (72), Expect = 2.1
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 242 LHFFYLHLFTYRTRXLL*IF*LKICMINWXYNFIYTNSNCFHRXC 376
+H L + T+ T+ LL I L + +W Y I +S CFHR C
Sbjct: 56 IHLLPLPVCTHWTKYLLWILPLLRNLKHWHYTTINYHSYCFHRIC 100
>UniRef50_Q8LYW3 Cluster: Apocytochrome b; n=2; Polytomella|Rep:
Apocytochrome b - Polytomella parva
Length = 370
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
L L QI+TG+ L ++Y + +AFY V ++ +V YG +IR H NGAS FF+ F+++
Sbjct: 38 LLLASQIVTGILLAMHYCPDTSLAFYSVIHLTVDVPYGFVIRYFHMNGASLFFVAVFLHL 97
>UniRef50_Q34992 Cluster: Cytochrome b; n=1; Meloidogyne hapla|Rep:
Cytochrome b - Meloidogyne hapla (Root-knot nematode
worm)
Length = 132
Score = 50.4 bits (115), Expect = 1e-05
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYISDE 282
IIQ+I+GL L++YY++ +F + Y+ VN G +IR +H N S FF+ F++I
Sbjct: 38 IIQVISGLMLSLYYSSESNFSFNSIQYLMIEVNKGWLIRLIHFNLVSFFFMMLFLHILKA 97
Query: 283 XF 288
F
Sbjct: 98 LF 99
>UniRef50_Q06SB2 Cluster: Cytochrome b; n=1; Hiatella arctica|Rep:
Cytochrome b - Hiatella arctica
Length = 384
Score = 50.0 bits (114), Expect = 2e-05
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 103 LIIQIITGLFLTIYYT-ANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 270
L +QI++G+ L++YY +E AF + +I R+VN G I+R++H GAS F F F+Y
Sbjct: 42 LFVQILSGMLLSLYYVPGTMEDAFNSIQFIERDVNGGWILRSVHVAGASSFFF-FMY 97
Score = 32.3 bits (70), Expect = 3.6
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FF +Y H+GRG+YY S+ YVLP GQ+S
Sbjct: 92 FFFFMYCHVGRGLYYGSYKNFKAWSMGVAILALSMLEGFMGYVLPAGQMS 141
>UniRef50_Q02768 Cluster: Cytochrome b; n=889; Apicomplexa|Rep:
Cytochrome b - Plasmodium falciparum
Length = 376
Score = 49.6 bits (113), Expect = 2e-05
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 273
+ IQIITG+FL YT ++ A+Y + +I R + G R +HA GAS FL +++I
Sbjct: 34 IIFFIQIITGVFLASRYTPDVSYAYYSIQHILRELWSGWCFRYMHATGASLVFLLTYLHI 93
>UniRef50_Q5NNX9 Cluster: Cytochrome b subunit; n=1; Zymomonas
mobilis|Rep: Cytochrome b subunit - Zymomonas mobilis
Length = 418
Score = 48.8 bits (111), Expect = 4e-05
Identities = 28/59 (47%), Positives = 36/59 (61%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+ L IQIITGL L ++Y A+ AF + I R V +G +IR H GAS F FA +YI
Sbjct: 54 IALTIQIITGLALAMHYVASSNEAFNSIEAIMRYVGFGWLIRYGHMVGASLF-FAALYI 111
>UniRef50_Q06824 Cluster: , mobile intron of apocytochrome b gene;
n=2; Chlamydomonas|Rep: , mobile intron of apocytochrome
b gene - Chlamydomonas smithii
Length = 374
Score = 48.4 bits (110), Expect = 5e-05
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+ L Q++TG+ L ++Y +++ AF V ++ +V G I+R HANGAS FF+ ++++
Sbjct: 38 MMLASQMLTGILLAMHYVGHVDYAFASVQHLMTDVPSGMILRYAHANGASLFFIVVYLHV 97
>UniRef50_Q9GAU9 Cluster: Cytochrome b; n=2; Eulemur mongoz|Rep:
Cytochrome b - Eulemur mongoz (Mongoose lemur)
Length = 59
Score = 48.4 bits (110), Expect = 5e-05
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +3
Query: 189 LPKCKLWLNNSNITC*WSFIFFICIYLHIGRGIYYESFNL 308
LP+ KLWL+ S + + +FF+C+++HIGRG+YY SF L
Sbjct: 6 LPRRKLWLSYSLPSRNGASMFFLCLFIHIGRGLYYGSFTL 45
>UniRef50_P56773 Cluster: Cytochrome b6; n=298; cellular
organisms|Rep: Cytochrome b6 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 215
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 100 CLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 267
C ++Q+ TG +T YY + AF V YI N+G +IR++H AS + I
Sbjct: 43 CFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMI 98
>UniRef50_UPI00015C5733 Cluster: hypothetical protein CKO_01262;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_01262 - Citrobacter koseri ATCC BAA-895
Length = 390
Score = 46.4 bits (105), Expect = 2e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 109 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFA 261
+QI++GL L ++Y +AF + +I R+V +G ++R H+ GAS F FA
Sbjct: 41 VQILSGLVLAMFYVPTEGLAFDSIIHIMRSVRHGELVRNAHSIGASLFFFA 91
>UniRef50_Q9PEW9 Cluster: Ubiquinol cytochrome C oxidoreductase,
cytochrome B subunit; n=20; cellular organisms|Rep:
Ubiquinol cytochrome C oxidoreductase, cytochrome B
subunit - Xylella fastidiosa
Length = 420
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +1
Query: 103 LIIQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFLFAFIYI 273
L+ Q++TG+FL ++Y ++ AF + I R+V +G +IR +H+ GAS F F +Y+
Sbjct: 54 LVNQVVTGIFLAMHYKPSVAEAFQSIEMTIMRDVEWGWLIRYMHSTGASLF-FIGVYL 110
>UniRef50_Q9B8A8 Cluster: Apocytochrome b; n=1; Trichinella
spiralis|Rep: Apocytochrome b - Trichinella spiralis
(Trichina worm)
Length = 371
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIY 270
+ + IQI+TGL L +Y++ + AF + + R V +G ++R +H NGAS F+F +Y
Sbjct: 36 MLMSIQIMTGLLLVMYFSTSESEAFNSIITLMREVKFGFLLRFMHLNGAS-FIFMTMY 92
>UniRef50_P46912 Cluster: Menaquinol-cytochrome c reductase
cytochrome b subunit; n=24; Bacillaceae|Rep:
Menaquinol-cytochrome c reductase cytochrome b subunit -
Bacillus subtilis
Length = 224
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/50 (40%), Positives = 34/50 (68%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 255
+IQ+++G+FLT+YY +I+ A+ V Y+ V +G I+R +H GAS +
Sbjct: 53 VIQVLSGMFLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVI 102
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 45.6 bits (103), Expect = 4e-04
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 273
+ IQI+TG+FL Y+ I A+Y + +I R + G R +HA GAS F +++I
Sbjct: 200 IIFFIQILTGVFLASRYSPEISYAYYSIQHILRELWSGWCFRYMHATGASLVFFLTYLHI 259
>UniRef50_Q9ZGG0 Cluster: Cytochrome b6; n=3; Heliobacteriaceae|Rep:
Cytochrome b6 - Heliobacillus mobilis
Length = 213
Score = 45.6 bits (103), Expect = 4e-04
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
L ++Q +TGLFL +YY E AF V I V +G IR+LH A+ L F+++
Sbjct: 40 LAFLVQCVTGLFLALYYKPTPEAAFASVQMITNEVRFGATIRSLHHWAANLMILLVFLHM 99
Query: 274 SDEXFT 291
+T
Sbjct: 100 LRVYYT 105
>UniRef50_Q4KTX4 Cluster: Cytochrome b; n=3; Lanius meridionalis
koenigi|Rep: Cytochrome b - Lanius meridionalis koenigi
Length = 108
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/50 (46%), Positives = 26/50 (52%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FFICIYLHIGRG+YY S+ K YVLP GQ+S
Sbjct: 56 FFICIYLHIGRGLYYGSYMNKETWNVGIILLLMLMATAFVGYVLPWGQMS 105
>UniRef50_Q5FTF2 Cluster: Ubiquinol-cytochrome c reductase
cytochrome b subunit; n=1; Gluconobacter oxydans|Rep:
Ubiquinol-cytochrome c reductase cytochrome b subunit -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 392
Score = 43.6 bits (98), Expect = 0.001
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +1
Query: 103 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+ I +GLFL I YT +I AF V I R V G IR+LH G + LFA +YI
Sbjct: 53 MAFMIASGLFLAINYTPDITQAFASVEAIDRQVPSGWFIRSLHMGGVT-MLFACLYI 108
Score = 32.3 bits (70), Expect = 3.6
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNL--KYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
+ F C+Y+HIGR ++Y S+ + + L YVLP GQ+S
Sbjct: 101 MLFACLYIHIGRSLWYGSYKAPRELLWLTGLGLMLMVMVTAFAGYVLPWGQMS 153
>UniRef50_Q9B305 Cluster: Cytochrome b; n=19; Eukaryota|Rep:
Cytochrome b - Ranina ranina
Length = 179
Score = 42.7 bits (96), Expect = 0.003
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +3
Query: 249 FFICIYLHIGRGIYYESFNLKYV*LXXXXXXXXXXXXXXXXYVLP*GQIS 398
FFIC+Y+HIGRGI+Y S+ + + YVLP GQ+S
Sbjct: 7 FFICLYIHIGRGIFYGSYMTFHAWMIGVVILFMVMAAAFLGYVLPWGQMS 56
>UniRef50_Q35015 Cluster: Cytochrome b; n=1; Meloidogyne
javanica|Rep: Cytochrome b - Meloidogyne javanica
(Root-knot nematode worm)
Length = 113
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYI 273
+ +Q+I+GL L+++Y ++ +F + Y+ VN G +IR +H N S FF+ +++
Sbjct: 35 IIFFMQVISGLLLSLFYESSSNFSFDSIQYLMIEVNNGWLIRLIHFNMVSLFFMLVMLHM 94
Query: 274 SDEXF 288
F
Sbjct: 95 LKALF 99
>UniRef50_Q74CM4 Cluster: Cytochrome b/b6; n=4; Geobacter|Rep:
Cytochrome b/b6 - Geobacter sulfurreducens
Length = 367
Score = 41.9 bits (94), Expect = 0.004
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 109 IQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 255
IQ++TG+ L IYY + + AF V I +V +G +IR HA G++ +
Sbjct: 50 IQVVTGILLLIYYVPDADKAFRSVTAIMNDVPFGWLIRMCHAVGSNMMV 98
>UniRef50_P81376 Cluster: Cytochrome b; n=1; Plasmodium
gallinaceum|Rep: Cytochrome b - Plasmodium gallinaceum
Length = 300
Score = 41.9 bits (94), Expect = 0.004
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASF-FLFAFIYI 273
+ IQI+ G+ L + + A+Y V +I R + G R +HA GASF F+ +++I
Sbjct: 34 IVFFIQILKGVLLALVILQKLSYAYYSVQHILRAIMDGWCFRYMHATGASFVFILTYLHI 93
>UniRef50_Q0Z877 Cluster: Cytochrome b; n=7; Mermithidae|Rep:
Cytochrome b - Agamermis sp. BH-2006
Length = 388
Score = 41.5 bits (93), Expect = 0.006
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +1
Query: 94 ALCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
+L + IQIITGLFLT YY N E F + I YG ++ +H N S +F IY+
Sbjct: 33 SLIMSIQIITGLFLTFYY-ENSENCFDSIYIIHIETFYGVLVHFIHLN-VSSIIFFLIYL 90
>UniRef50_A6Q5D2 Cluster: Ubiquinol cytochrome c oxidoreductase,
cytochrome b subunit; n=26; Epsilonproteobacteria|Rep:
Ubiquinol cytochrome c oxidoreductase, cytochrome b
subunit - Nitratiruptor sp. (strain SB155-2)
Length = 465
Score = 41.1 bits (92), Expect = 0.008
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 109 IQIITGLFLTIYYTANIEIAFYRVNY-ICRNVNYG*IIRTLHANGASFFLFAFIYI 273
I +I+G+FL +YY + ++AF VNY I + V +G + R +HA AS +F IYI
Sbjct: 53 ILLISGIFLLMYYKPDTKLAFDSVNYTIMQEVWFGWLWRHMHAVAAS-VVFLVIYI 107
>UniRef50_Q1EN74 Cluster: Cytochrome b; n=2; Heligmosomoides
polygyrus|Rep: Cytochrome b - Heligmosomoides polygyrus
Length = 211
Score = 41.1 bits (92), Expect = 0.008
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 166 AFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYISDEXFTMN 297
AF V YI VNYG I R H NGAS FF+F +++I F M+
Sbjct: 2 AFNVVXYIMYEVNYGWIFRIFHFNGASLFFVFLYLHIFKGLFMMS 46
>UniRef50_Q85RG3 Cluster: Cytochrome b; n=1; Aegotheles savesi|Rep:
Cytochrome b - Aegotheles savesi (New Caledonian
owlet-nightjar)
Length = 96
Score = 40.7 bits (91), Expect = 0.010
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 103 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNY 207
L+ I+TGL L ++YTA+ +AF V + CRNV Y
Sbjct: 4 LVTXILTGLLLAMHYTADATLAFSSVAHTCRNVQY 38
>UniRef50_Q18UP1 Cluster: Cytochrome b/b6-like; n=2;
Desulfitobacterium hafniense|Rep: Cytochrome b/b6-like -
Desulfitobacterium hafniense (strain DCB-2)
Length = 215
Score = 38.3 bits (85), Expect = 0.055
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 267
L ++Q++TG+ L +YY +E A+ V +I V G +R++H A+ L +
Sbjct: 42 LLFLVQVVTGIVLAVYYNPTMEGAYQSVMFINDEVFMGKALRSVHNIAANLMLIMVV 98
>UniRef50_Q9DDQ5 Cluster: Cytochrome b; n=15; Decapterus
russelli|Rep: Cytochrome b - Decapterus russelli (Indian
scad)
Length = 102
Score = 37.9 bits (84), Expect = 0.072
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 99 MSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNITC*WSFIFFICIYL 269
+ N N +W + + LH ++ N F +LP+CKL L +S TC W I + +YL
Sbjct: 7 LPNYPNPHWTLPCHTLHLRHRNCFHIRCTHLPRCKLRLTHSQHTCQWR-ILLLHLYL 62
>UniRef50_Q9F721 Cluster: Cytochrome bc complex cytochrome b
subunit; n=11; Chlorobiaceae|Rep: Cytochrome bc complex
cytochrome b subunit - Chlorobium tepidum
Length = 428
Score = 37.5 bits (83), Expect = 0.096
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGAS-FFLFAFIYISDE 282
IIQI+TGL L YY AF +I V +G +IR +HA A+ L FI++
Sbjct: 118 IIQILTGLLLLQYYKPTETDAFSSFLFIQGQVPFGWLIRQIHAWSANLMILMLFIHMFST 177
Query: 283 XF 288
F
Sbjct: 178 FF 179
>UniRef50_Q6TY86 Cluster: Cytochrome b; n=1; Xiphinema
americanum|Rep: Cytochrome b - Xiphinema americanum
Length = 366
Score = 37.1 bits (82), Expect = 0.13
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLF 258
+ + IQ+ +GL L Y++ +A+ V I R V G ++R++H+N ASF F
Sbjct: 33 ILMAIQVASGLILAFCYSSGF-LAWSSVVEITREVYAGWLVRSIHSNTASFVFF 85
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 36.7 bits (81), Expect = 0.17
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 267
+++ ITGL L IYY+ + A+ + I +V G ++R +H GA F + I
Sbjct: 86 VLEAITGLVLMIYYSPSPNEAYATMTQIMNDVPLGGLMRNVHRLGAHFMVAVVI 139
>UniRef50_Q1ARW1 Cluster: Cytochrome b/b6-like protein; n=2;
Rubrobacter xylanophilus DSM 9941|Rep: Cytochrome
b/b6-like protein - Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129)
Length = 257
Score = 36.3 bits (80), Expect = 0.22
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 103 LIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 255
+ +Q +TG+ L YY + A+ V YI +G +IR +H A+F +
Sbjct: 56 ITLQFLTGILLLFYYVPTTDHAWNSVYYIMNEAYFGKLIRGIHYWSANFLM 106
>UniRef50_Q9MYR6 Cluster: Cytochrome b; n=4; Cetartiodactyla|Rep:
Cytochrome b - Ovis aries (Sheep)
Length = 113
Score = 35.5 bits (78), Expect = 0.39
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 242 LHFFYLHLFTYRTRXLL*IF*LKICMINWXYNFIYTNSNCFHRXCLTLRXNI 397
++ FYL ++ RTR +L I L M + I NS+ HR C T+R NI
Sbjct: 59 INIFYLPIYACRTRPILWIIYLPRNMKHRSNPPICDNSHSIHRLCFTMRPNI 110
>UniRef50_A3ZQU1 Cluster: Menaquinol-cytochrome-c reductase
cytochrome b subunit; n=1; Blastopirellula marina DSM
3645|Rep: Menaquinol-cytochrome-c reductase cytochrome b
subunit - Blastopirellula marina DSM 3645
Length = 639
Score = 35.1 bits (77), Expect = 0.51
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLH 231
++Q+ITG FL + Y+AN + A+ V YI + G I+R LH
Sbjct: 45 VVQMITGTFLWMAYSANSKGAWESVYYIQYEMQGGWILRGLH 86
>UniRef50_A5D6K1 Cluster: Apocytochrome b; n=10; Arthropoda|Rep:
Apocytochrome b - Bothropolys sp. SP-2004
Length = 378
Score = 35.1 bits (77), Expect = 0.51
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 45 T*PI*YFFLMKYRIPTSFMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSN 224
T PI + +K+RI S M + N+ IIF+N L Y N S L+ K + ++ +
Sbjct: 24 TIPIKFILHVKFRILISIMFSYPNHNSIIFSNTLFRSYYNCLWYSNLHFTKRQHSMSYTC 83
Query: 225 ITC 233
ITC
Sbjct: 84 ITC 86
>UniRef50_Q7M2D4 Cluster: Ubiquinol-cytochrome-c reductase (EC
1.10.2.2) cytochrome b; n=1; Triticum timopheevii|Rep:
Ubiquinol-cytochrome-c reductase (EC 1.10.2.2)
cytochrome b - Triticum timopheevi (Sanduri wheat)
Length = 207
Score = 34.7 bits (76), Expect = 0.67
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 246 IFFICIYLHIGRGIYYESFNLKYV 317
+FFI +YLHI RG+YY S+ ++V
Sbjct: 25 MFFIVVYLHIFRGLYYASYPREFV 48
>UniRef50_Q4N4S6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 302
Score = 34.7 bits (76), Expect = 0.67
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 201 KLWLNNSNITC*WSFIFFICIYLHIG 278
KLW+ S+ITC WS + F IY H G
Sbjct: 259 KLWIRYSSITCTWSNLKFYSIYRHTG 284
>UniRef50_A3ER63 Cluster: Cytochrome b subunit of the bc complex;
n=1; Leptospirillum sp. Group II UBA|Rep: Cytochrome b
subunit of the bc complex - Leptospirillum sp. Group II
UBA
Length = 458
Score = 33.5 bits (73), Expect = 1.6
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +1
Query: 103 LIIQIITGLFLTIYYTANIEIAFYRVNYICR----NVNYG*IIRTLHANGASFFL 255
LI+Q +TG+ L YY + A+ VNYI ++ G +IR H GAS +
Sbjct: 50 LILQFVTGVMLAFYYGGTPDHAWDSVNYIDHLHYGTLDVGRLIRGFHYWGASIMV 104
>UniRef50_Q01PC6 Cluster: Cytochrome b/b6, N-terminal domain; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome b/b6,
N-terminal domain - Solibacter usitatus (strain
Ellin6076)
Length = 499
Score = 32.7 bits (71), Expect = 2.7
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFL 255
++Q++TG+ L + Y + A+ + + +++ G IR LH G++F +
Sbjct: 49 LLQMVTGILLALIYVPSAGEAWNSLQTLNHSISMGWFIRALHGWGSNFMI 98
>UniRef50_Q25811 Cluster: Rps17 protein; n=1; Plasmodium
falciparum|Rep: Rps17 protein - Plasmodium falciparum
Length = 74
Score = 32.7 bits (71), Expect = 2.7
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -3
Query: 202 LHFGKYNLLYKKLFQYLLCNILLKIIQ**FELLDIKLVGILYFIKKKY 59
+ F KYN YKKL LLCN+ +KI E++ + Y+ K KY
Sbjct: 21 ISFYKYNFKYKKL---LLCNLYIKIYDNRNEIIINDYILFKYYKKSKY 65
>UniRef50_Q97UN3 Cluster: Quinol oxidase-2, cytochrome b; n=5;
Sulfolobaceae|Rep: Quinol oxidase-2, cytochrome b -
Sulfolobus solfataricus
Length = 549
Score = 32.7 bits (71), Expect = 2.7
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 267
I+++ITG + +YYT + + Y+ V YG + +LH+ GA +F +
Sbjct: 90 ILEVITGALVALYYTPS--DPYTSTTYLISKVPYGAFLFSLHSWGAYAMVFLLL 141
>UniRef50_A6CCS1 Cluster: Cytochrome b6; n=1; Planctomyces maris DSM
8797|Rep: Cytochrome b6 - Planctomyces maris DSM 8797
Length = 665
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 97 LCLIIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFI 267
L ++++++TG L Y+ + A+ V+YI V+ G +R LH A + A +
Sbjct: 46 LMMLVEMVTGALLMTVYSPSEASAWGSVHYIETQVDLGWFVRGLHHYTAHMMIVAIV 102
>UniRef50_Q9B8V1 Cluster: Cytochrome b; n=66; Platyhelminthes|Rep:
Cytochrome b - Schistosoma mekongi
Length = 372
Score = 32.3 bits (70), Expect = 3.6
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 240 SFIFFICIYLHIGRGIYYESFNL 308
S IFF+ +Y+HIGR +YY S+ +
Sbjct: 77 SIIFFL-VYVHIGRSLYYSSYRM 98
>UniRef50_Q01YB7 Cluster: Cytochrome b/b6, N-terminal domain; n=6;
Bacteria|Rep: Cytochrome b/b6, N-terminal domain -
Solibacter usitatus (strain Ellin6076)
Length = 281
Score = 31.9 bits (69), Expect = 4.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 106 IIQIITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGA 243
I + TG L YY + +AF + Y+ +V +G ++R +H GA
Sbjct: 82 ITLVFTGTLLMFYYHPSKVVAFRDILYLESDVPFGKLLRNMHRWGA 127
>UniRef50_Q05FV0 Cluster: Putative uncharacterized protein; n=1;
Candidatus Carsonella ruddii PV|Rep: Putative
uncharacterized protein - Carsonella ruddii (strain PV)
Length = 152
Score = 31.5 bits (68), Expect = 6.3
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 96 FMSNNSNYYWIIFNNILHSKY*NSFL*SKLYLPKCKLWLNNSNIT 230
++ NN Y +++ NN+++ + NSFL Y K+++ N+ +
Sbjct: 25 YIDNNIYYIYVLKNNLINKVFKNSFLNVLYYKKNIKVYIKNTKFS 69
>UniRef50_Q1DZA5 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 106
Score = 31.5 bits (68), Expect = 6.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -1
Query: 207 IVYISANIIYSIKSYFNICCVIYC 136
I+Y+SANI+ S+++ F + C + C
Sbjct: 73 IIYVSANIVLSLQNNFGVLCSVAC 96
>UniRef50_A0H4A6 Cluster: Adenylyl cyclase class-3/4/guanylyl
cyclase; n=1; Chloroflexus aggregans DSM 9485|Rep:
Adenylyl cyclase class-3/4/guanylyl cyclase -
Chloroflexus aggregans DSM 9485
Length = 421
Score = 31.1 bits (67), Expect = 8.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 232 HVMFELFNHSLHFGKYNLLYKKLFQY 155
H M ELF +S+HF N+L + L Y
Sbjct: 19 HYMLELFGNSIHFALANILLESLIDY 44
>UniRef50_P39480 Cluster: Cytochrome b; n=5; Sulfolobaceae|Rep:
Cytochrome b - Sulfolobus acidocaldarius
Length = 563
Score = 31.1 bits (67), Expect = 8.3
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 115 IITGLFLTIYYTANIEIAFYRVNYICRNVNYG*IIRTLHANGASFFLFAFIYI 273
IITGLFL +YY A+ I +V YG ++ H G S+ + YI
Sbjct: 51 IITGLFLLLYYQP--AFAYQSTQTIINSVPYGSVLLFSHLYG-SYIMILLAYI 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,139,382
Number of Sequences: 1657284
Number of extensions: 4966412
Number of successful extensions: 10453
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 10079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10439
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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