Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0159
         (548 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...   100   4e-20
UniRef50_A2DPG0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_Q5YYK8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_A0Y8A3 Cluster: D-glutamate deacylase; n=1; marine gamm...    33   5.8  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score = 99.5 bits (237), Expect = 4e-20
 Identities = 43/83 (51%), Positives = 60/83 (72%)
 Frame = +2

Query: 5    TVTYPTSSDSPYIFSGEACLDLDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFXHPRLD 184
            T+T+PTS D P+   GEACLDLDK + GHKTS R+L++ SN+ +++   AEIGF HP+++
Sbjct: 2157 TLTHPTSQDLPFPIKGEACLDLDKNRPGHKTSARFLVDYSNSGSEDKAVAEIGFFHPKIE 2216

Query: 185  KEVVIKSNAVFKVPEPNRYILES 253
            KE VI+ NA  K PE   + +ES
Sbjct: 2217 KEAVIRLNAFMKRPENGCFKIES 2239



 Score = 91.1 bits (216), Expect = 2e-17
 Identities = 41/87 (47%), Positives = 57/87 (65%)
 Frame = +1

Query: 259  SLCHSSLGADRVSKLLLDVSPTKFVFLAQTPFVKVIDLEGTVDVQSKAKTQQAKLRFKLL 438
            SLCHS+LG DRV+K++ + +P    FLA TPFVK ID+EG+ +V  + +TQQ   R  LL
Sbjct: 2242 SLCHSALGTDRVAKVMFETTPNSVKFLADTPFVKAIDVEGSFNVNQQQRTQQCLFRICLL 2301

Query: 439  EGKXVSVQALAKDFPVFRVHNRRADRK 519
            EGK V + AL KD+  +      ++RK
Sbjct: 2302 EGKPVQMSALVKDYQYYEFTTEESNRK 2328


>UniRef50_A2DPG0 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1122

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +2

Query: 41   IFSGEACLD-LDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFXHPRLDKEVVIKSNAVF 217
            +FS + C+D L+KK Q H+ S  +  N SN ++ + I   I     +  KE+ I++++  
Sbjct: 780  LFSQD-CIDKLNKKPQKHQVSQPHGKN-SNPKSIQRIKDRISDQKFQSQKEITIETDSYI 837

Query: 218  KVPEPNRYILES*SAYVTPLSALIASPN 301
             +P      L S  + +TP  A   +PN
Sbjct: 838  NIPIEKSNSLTSFDSILTPPPAFGNNPN 865


>UniRef50_Q5YYK8 Cluster: Putative uncharacterized protein; n=1;
           Nocardia farcinica|Rep: Putative uncharacterized protein
           - Nocardia farcinica
          Length = 120

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 481 GSLSPEPGR*XPCPLEA*TS-TWPAGSSPCFA 389
           G+++P  G   PCPL+     TWPAG+ P +A
Sbjct: 8   GTMAPVTGAPEPCPLDCLVEITWPAGARPWWA 39


>UniRef50_A0Y8A3 Cluster: D-glutamate deacylase; n=1; marine gamma
           proteobacterium HTCC2143|Rep: D-glutamate deacylase -
           marine gamma proteobacterium HTCC2143
          Length = 501

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 17/47 (36%), Positives = 30/47 (63%)
 Frame = +1

Query: 376 GTVDVQSKAKTQQAKLRFKLLEGKXVSVQALAKDFPVFRVHNRRADR 516
           G +D+ S A+TQ  + ++++L+G   S++  A  +PV  V N+ ADR
Sbjct: 85  GFIDLHSHAQTQLGQ-KYQVLDGVTTSLELEAGAYPVAAVGNQIADR 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,330,342
Number of Sequences: 1657284
Number of extensions: 10581356
Number of successful extensions: 27376
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27369
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)