Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0156
         (319 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0M6E8 Cluster: Ion transport:Ion transport 2; n=1; Cau...    33   1.6  
UniRef50_UPI00006CF378 Cluster: ATPase, histidine kinase-, DNA g...    31   3.8  
UniRef50_A6UFZ2 Cluster: Ion transport 2 domain protein; n=3; Rh...    31   5.0  
UniRef50_A0E7U6 Cluster: Chromosome undetermined scaffold_81, wh...    31   5.0  
UniRef50_A0BCE3 Cluster: Chromosome undetermined scaffold_10, wh...    31   5.0  
UniRef50_A0D1F9 Cluster: Chromosome undetermined scaffold_34, wh...    31   6.6  
UniRef50_Q7QZJ1 Cluster: GLP_159_34334_32187; n=1; Giardia lambl...    30   8.7  

>UniRef50_Q0M6E8 Cluster: Ion transport:Ion transport 2; n=1;
           Caulobacter sp. K31|Rep: Ion transport:Ion transport 2 -
           Caulobacter sp. K31
          Length = 271

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 311 PLKWLDCTDLLVDIFPEMLYGFGHLMVIRIFC*TH 207
           P+ W+D   L   +FP  L+ FG L V+R++   H
Sbjct: 99  PITWIDLFVLATLLFPAWLFNFGFLRVVRLWTLIH 133


>UniRef50_UPI00006CF378 Cluster: ATPase, histidine kinase-, DNA
           gyrase B-, and HSP90-like domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           containing protein - Tetrahymena thermophila SB210
          Length = 909

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +2

Query: 77  YSYYLNTGSVIFLSFE--LLTYLHLKDKNELRRF 172
           YSY+L   ++  L FE  LL  L++KDKNE ++F
Sbjct: 48  YSYFLEQENINALFFEATLLLILYMKDKNEKQQF 81


>UniRef50_A6UFZ2 Cluster: Ion transport 2 domain protein; n=3;
           Rhizobiaceae|Rep: Ion transport 2 domain protein -
           Sinorhizobium medicae WSM419
          Length = 265

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 311 PLKWLDCTDLLVDIFPEMLYGFGHLMVIRIF 219
           P+ W+D   L   +FP++L+ F  L V+RI+
Sbjct: 93  PMTWVDVVILGTLLFPDLLFNFAFLRVMRIW 123


>UniRef50_A0E7U6 Cluster: Chromosome undetermined scaffold_81, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_81,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 352

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +2

Query: 74  PYSYYLNTGSVIFLSFELLTYLHLKDKNELRRFCTGVRRQSFAQNEFSKKF 226
           P  Y+LNTG +I+LS++   Y  L D+    +F   +  ++F +   S  F
Sbjct: 278 PIGYFLNTGGMIYLSYQ---YFKLNDEWSHSKFSNYLINKNFVRLSRSNNF 325


>UniRef50_A0BCE3 Cluster: Chromosome undetermined scaffold_10, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_10,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 385

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 74  PYSY-YLNTGSVIFLSFELLTYLHLKDKNELRRFCTGVRRQSFAQNEFSKKF 226
           PY Y Y      IF   + L  ++L   +ELR+  T +   S++QN+F KKF
Sbjct: 38  PYLYFYQGLCDNIFTKGQRLLIIYLLYNSELRQSLTDI--SSYSQNQFEKKF 87


>UniRef50_A0D1F9 Cluster: Chromosome undetermined scaffold_34, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_34,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 486

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = -3

Query: 296 DCTDLLVDIFPEMLYGFGHLMVIRIFC*THFGRNFV---FGRQCRIFGAHFYPLDVNRSI 126
           +C ++L+D+F +M++ +GH     + C  H G   +    G+Q  +   H +  D+++ +
Sbjct: 282 ECANILIDMFGQMIFKYGH-----VHCDAHPGNILIREQNGKQQLVLLDHGFYTDIDQEM 336

Query: 125 VQ 120
           +Q
Sbjct: 337 LQ 338


>UniRef50_Q7QZJ1 Cluster: GLP_159_34334_32187; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_159_34334_32187 - Giardia lamblia
           ATCC 50803
          Length = 715

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 143 LKDKNELRRFCTGVRRQSFAQNEFSKKFG*PLSDQNHITSPEIYQPVGPYSPA 301
           LK+  +L   C G+   S AQ    +  G PL     IT P    PV   SP+
Sbjct: 539 LKNAIQLYSHCKGMHATSSAQKPRKENAGYPLDQHTIITEPSACLPVMTNSPS 591


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,246,543
Number of Sequences: 1657284
Number of extensions: 5601859
Number of successful extensions: 12019
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12016
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)