Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0156
         (319 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   2.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   2.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   2.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   2.8  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   4.8  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    22   6.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    21   8.4  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    21   8.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    21   8.4  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 62  YVGIPYSYYLNTGSVIFLSFELLTYLH 142
           +V  PY + +N G  I LS E  ++++
Sbjct: 1   FVSQPYRFLVNNGCYIVLSTEWTSFVN 27


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 62  YVGIPYSYYLNTGSVIFLSFELLTYLH 142
           +V  PY + +N G  I LS E  ++++
Sbjct: 1   FVSQPYRFLVNNGCYIVLSTEWTSFVN 27


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 62  YVGIPYSYYLNTGSVIFLSFELLTYLH 142
           +V  PY + +N G  I LS E  ++++
Sbjct: 1   FVSQPYRFLVNNGCYIVLSTEWTSFVN 27


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 62  YVGIPYSYYLNTGSVIFLSFELLTYLH 142
           +V  PY + +N G  I LS E  ++++
Sbjct: 1   FVSQPYRFLVNNGCYIVLSTEWTSFVN 27


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 168 DSALASEDKVSPKMSSAKNSDNH 236
           DSALA +DK S + S A    +H
Sbjct: 479 DSALAEDDKDSTRESPAIVEQHH 501


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 281 LVDIFPEMLYGFGHLMVI 228
           L+DI  E ++G G+L+V+
Sbjct: 345 LIDIAEENVFGAGYLVVL 362


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 212 FSKKFG*PLSDQNHITSPEIYQP 280
           FS+ F  P+SD N I    +Y P
Sbjct: 437 FSQMFEPPVSDPNLIEGGLLYTP 459


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 239 SDQNHITSPEIYQPV 283
           SD + ++S E YQP+
Sbjct: 482 SDSDSLSSEEFYQPI 496


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 239 SDQNHITSPEIYQPV 283
           SD + ++S E YQP+
Sbjct: 482 SDSDSLSSEEFYQPI 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,568
Number of Sequences: 2352
Number of extensions: 6197
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)