Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0155
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 169 8e-43
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 169 1e-42
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 167 6e-42
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 149 1e-36
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 126 1e-29
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 1e-21
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 97 5e-21
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 97 5e-21
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 97 9e-21
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 4e-20
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 95 4e-20
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 4e-18
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 67 7e-12
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 61 4e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 56 2e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 51 5e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 44 9e-05
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 41 5e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 1.6
SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29) 29 2.1
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 27 8.6
SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9) 27 8.6
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 27 8.6
SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7) 27 8.6
SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015) 27 8.6
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 169 bits (412), Expect = 8e-43
Identities = 77/79 (97%), Positives = 79/79 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 260 INVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 319
Query: 437 TEGAELVDSVLDVVRKEAE 493
TEGAELVDSVLDVVRKEAE
Sbjct: 320 TEGAELVDSVLDVVRKEAE 338
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 258
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 169 bits (411), Expect = 1e-42
Identities = 76/79 (96%), Positives = 79/79 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAE 493
TEGAELVDSVLDVVRKEAE
Sbjct: 107 TEGAELVDSVLDVVRKEAE 125
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 167 bits (405), Expect = 6e-42
Identities = 74/79 (93%), Positives = 79/79 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 436
INVYYNEA+GGKYVPR+V++DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY
Sbjct: 47 INVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHY 106
Query: 437 TEGAELVDSVLDVVRKEAE 493
TEGAEL+DSVLDVVRKEAE
Sbjct: 107 TEGAELMDSVLDVVRKEAE 125
Score = 90.2 bits (214), Expect = 8e-19
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIV +QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 149 bits (362), Expect = 1e-36
Identities = 68/69 (98%), Positives = 69/69 (100%)
Frame = +2
Query: 287 GKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 466
GKYVPRAV+VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 467 LDVVRKEAE 493
LDVVRKEAE
Sbjct: 62 LDVVRKEAE 70
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 126 bits (304), Expect = 1e-29
Identities = 52/71 (73%), Positives = 64/71 (90%)
Frame = +2
Query: 281 SGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 460
+GG+YVPR+++VDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 461 SVLDVVRKEAE 493
++ DV+RKEAE
Sbjct: 71 NIFDVLRKEAE 81
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 99 bits (238), Expect = 1e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +2
Query: 257 INVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVF 394
INVYYNEA+GGKYVPRA++VDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 47 INVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 254
MREIVH QAGQCGNQIGAKFWEVISDEHGID TG Y GDSDLQLE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLE 45
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 97.5 bits (232), Expect = 5e-21
Identities = 42/81 (51%), Positives = 58/81 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G E+VD VLD +RK A++
Sbjct: 108 YTVGKEIVDLVLDRIRKLADQ 128
Score = 97.1 bits (231), Expect = 7e-21
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 481 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 540
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G E+VD VLD +RK A++
Sbjct: 541 YTVGKEIVDLVLDRIRKLADQ 561
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 97.5 bits (232), Expect = 5e-21
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 633 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 692
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G EL+D VLD +RK A++
Sbjct: 693 YTVGKELIDLVLDRIRKLADQ 713
Score = 96.7 bits (230), Expect = 9e-21
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 112 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 171
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G E+VD VLD +RK A++
Sbjct: 172 YTIGKEIVDLVLDRIRKLADQ 192
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSV 346
S N +++E GK+VPRAV VDLEP + +
Sbjct: 560 SFNTFFSETGAGKHVPRAVFVDLEPTVRECI 590
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 117 IMREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+ RE + + GQ G QIG WE+ EHGI G D +
Sbjct: 64 LQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
+RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 96.7 bits (230), Expect = 9e-21
Identities = 40/81 (49%), Positives = 58/81 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 47 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 106
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G E++D VLD +RK A++
Sbjct: 107 YTVGKEIIDLVLDRIRKLADQ 127
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 95.1 bits (226), Expect = 3e-20
Identities = 39/81 (48%), Positives = 57/81 (70%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 852 SFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 911
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G E++D VLD +RK A++
Sbjct: 912 YTVGKEMIDLVLDRIRKLADQ 932
Score = 91.5 bits (217), Expect = 4e-19
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
+ N ++ E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 419 AFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 478
Query: 434 YTEGAELVDSVLDVVRKEAE 493
YT G E +D VLD +RK A+
Sbjct: 479 YTVGKEQIDIVLDRLRKLAD 498
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + I GQ G QIG WE+ EHGI G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 95.1 bits (226), Expect = 3e-20
Identities = 38/81 (46%), Positives = 58/81 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 466 SFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGH 525
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G + +D+VLD +RK A++
Sbjct: 526 YTVGKDHIDNVLDRIRKLADQ 546
Score = 91.9 bits (218), Expect = 3e-19
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 33 SFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 92
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G +L++ VLD +RK A++
Sbjct: 93 YTVGKQLIEIVLDRLRKLADQ 113
Score = 35.9 bits (79), Expect = 0.019
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 123 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
RE V I GQ G Q+G WE+ EHGI G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 94.7 bits (225), Expect = 4e-20
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV DLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAE 493
YT G E++D+VLD +RK A+
Sbjct: 108 YTVGKEMIDTVLDRLRKLAD 127
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 94.7 bits (225), Expect = 4e-20
Identities = 40/81 (49%), Positives = 57/81 (70%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGH 107
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G E++D VLD RK A++
Sbjct: 108 YTIGKEIIDLVLDRCRKLADQ 128
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + I GQ G Q+G WE+ EHGI G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 90.6 bits (215), Expect = 6e-19
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N ++ E GK+VPRAV VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GH
Sbjct: 13 SFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGH 72
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G E +D LD +RK A++
Sbjct: 73 YTVGKEHIDLALDRIRKLADQ 93
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 87.8 bits (208), Expect = 4e-18
Identities = 36/75 (48%), Positives = 55/75 (73%)
Frame = +2
Query: 272 NEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 451
+EA+ GKYVPRAV+VDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 452 LVDSVLDVVRKEAER 496
+V+ V+D +RK ++
Sbjct: 1025 MVEVVMDKIRKMTDQ 1039
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 67.3 bits (157), Expect = 7e-12
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 433
S N +++E GK+VPRAV VDLEP + P+ + G+ A NN+A+GH
Sbjct: 48 SFNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGH 97
Query: 434 YTEGAELVDSVLDVVRKEAER 496
YT G + VD VLD +RK A++
Sbjct: 98 YTIGKQQVDQVLDRLRKLADQ 118
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 236
MRE + I GQ G QIG WE+ EHGI G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 63.7 bits (148), Expect = 8e-11
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 338 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAER 496
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A++
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQ 65
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 61.3 bits (142), Expect = 4e-10
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAER 496
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A++
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQ 53
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 484
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 55.6 bits (128), Expect = 2e-08
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAER 496
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A++
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQ 53
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 344 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 484
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 51.2 bits (117), Expect = 5e-07
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 398 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 493
Q+ A NNWAKG YTEGAEL+DS +D +RK AE
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAE 33
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 43.6 bits (98), Expect = 9e-05
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLD 472
RAV +D+E + S G P F Q G+GNNWA G G + +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 473 VVRKEAER 496
+V++E E+
Sbjct: 127 LVQREVEK 134
Score = 31.9 bits (69), Expect = 0.30
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 129 IVHIQAGQCGNQIGAKFWEVISDE 200
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 254 SINVYYNEASGGKYVPRAVMVDLEPGTMDSVR 349
S N +++E GGK+VPRAV VDLEP + ++
Sbjct: 48 SFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 245
MRE + + GQ G QIG WE+ EHGI G D +
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.1 bits (92), Expect = 5e-04
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 302 RAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 421
RAV++D+E G ++++ GP +F + SG GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.5 bits (83), Expect = 0.006
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 120 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL-QLEASMST 269
MRE + I GQ G QIG WE+ EHGI G D + + S ST
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFST 246
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 30.7 bits (66), Expect = 0.70
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 177 FWEVISDEHGIDATG 221
FWEVI++EHGID G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 408 APDCPKTKLSGRKICPNGPERTESMVPGSRSTITAR----GTYLP 286
A DCP ++ +GR +CP P +S + ++++I GT+ P
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKASIEVNDFTLGTHTP 182
>SB_17458| Best HMM Match : Metalloenzyme (HMM E-Value=0.29)
Length = 190
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 198 EHGIDATGAYSGDSDLQLEASMSTITK 278
+HG+ TG + GDSD +L+A++ +K
Sbjct: 137 DHGMTRTGDHGGDSDDELDAALFVYSK 163
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 399 CPKTKLSGRKICPNGPERTESMVPGSRSTITARGTYLPPEA 277
CP+ + RK P+G + + G+ S + ++G +PP A
Sbjct: 456 CPQGNMDYRKAAPDGRDMQQMGQKGNFSQMLSQGRGMPPGA 496
>SB_34911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 904
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -3
Query: 452 VQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRS-PWFQAQGPPSQL 303
V PP+C+ L S P S A+ A++G + W + + P +QL
Sbjct: 193 VHPPICDCLGCRISSPVVASPESIREAFEAENAKDGNADDWGEVKTPTNQL 243
>SB_46614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 190 SRTSTALTPRVLTAATPTCSLKHQCLL*RSFRGQVRPASC 309
++ S LT L A P KH+C + + +G +R ASC
Sbjct: 181 TKQSRKLTFIALCATHPRNVAKHRCDIDKGHQGSLRKASC 220
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 27.1 bits (57), Expect = 8.6
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = -3
Query: 461 NQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQ 306
+Q VQ PL L P Y PP V TA R P Q QGPP+Q
Sbjct: 1081 HQAVQQPLPQQLPPQYRPPAIV------------TAAVARPP--QVQGPPTQ 1118
>SB_47472| Best HMM Match : zf-CXXC (HMM E-Value=5.9)
Length = 433
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 415 IPRPRLSEDEVVRSEDLPKRPGTDGVHGSRLKVH 314
+P P S+++ +SE + RPG D SR VH
Sbjct: 64 LPPPLYSQNDHQKSEHILLRPGVDLKTASRCTVH 97
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 448 SPLCVMSFRPVIPRPRLSEDEVVRSEDL 365
+P + +F+P P RLSE E+VR DL
Sbjct: 407 NPKSLKAFQPFWPAIRLSELELVRRSDL 434
>SB_34195| Best HMM Match : Init_tRNA_PT (HMM E-Value=2.7)
Length = 597
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 407 PQTVRRRSCPVGRFAQTARN 348
P +R SCPVGR AQ +R+
Sbjct: 404 PNKKKRESCPVGRGAQFSRS 423
>SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 461 NQPVQPPLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPW 333
+ P+QP LC +SP + R+R+ +G + A R W
Sbjct: 479 SDPIQP-LCGPISPPQATTPQPRQRAHTIGAISDLAATRRHWW 520
>SB_4771| Best HMM Match : DEAD (HMM E-Value=0.015)
Length = 592
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 470 PVXNQPVQP-PLCNVLSPSYSPPQTVRRRSCPVGRFAQTARNGRSPWFQAQGPPSQL 303
PV + P P P+ N + P PP + A G SP F +QGPP +L
Sbjct: 65 PVASTPPAPQPVPNNMGP---PPHVNQGPPPNSANQAPPPNPGPSPSFNSQGPPQRL 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,784,915
Number of Sequences: 59808
Number of extensions: 356920
Number of successful extensions: 1010
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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