Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0151
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical ... 30 1.1
U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium chann... 30 1.4
U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium chann... 30 1.4
AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassi... 30 1.4
U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical p... 29 3.3
AF026215-7|ABR92608.1| 554|Caenorhabditis elegans Hypothetical ... 28 4.4
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 28 5.8
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 28 5.8
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 28 5.8
Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 27 7.7
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 27 7.7
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF016449-7|AAG24000.2| 350|Caenorhabditis elegans Hypothetical
protein C50H11.13 protein.
Length = 350
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 185 IYYTWNMRFEKKCMDMTF--KNATPKSFREYGTTCTSILMTSRTGMPPPYILVWARCGTR 358
IY+TW F ++C ++ F + T SF+ G C+ ++ + + P + R
Sbjct: 119 IYWTWVAMFAERCCNIFFPLRFRTSSSFKTAGVLCSILIFSMSIQLWTPIFITEKRLDNH 178
Query: 359 C-YFLPTKDPQ 388
Y +DP+
Sbjct: 179 MDYIYCGEDPR 189
>U41556-9|AAK39192.1| 692|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform a protein.
Length = 692
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 262 QRVWNDMHEYLDDQPNWNAATLHLSM 339
+R+ N MH +L+ W AAT HL++
Sbjct: 83 RRMQNKMHNFLERPRGWKAATYHLAV 108
>U41556-8|AAM51518.1| 740|Caenorhabditis elegans Potassium channel,
kvqlt familyprotein 1, isoform b protein.
Length = 740
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 262 QRVWNDMHEYLDDQPNWNAATLHLSM 339
+R+ N MH +L+ W AAT HL++
Sbjct: 131 RRMQNKMHNFLERPRGWKAATYHLAV 156
>AY572974-1|AAT77227.1| 692|Caenorhabditis elegans KQT-1 potassium
channel protein.
Length = 692
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 262 QRVWNDMHEYLDDQPNWNAATLHLSM 339
+R+ N MH +L+ W AAT HL++
Sbjct: 83 RRMQNKMHNFLERPRGWKAATYHLAV 108
>U28944-12|AAA68371.2| 363|Caenorhabditis elegans Hypothetical
protein C18A3.2 protein.
Length = 363
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 236 TSCPYTFFRTSCSTCNRSSMASL 168
TS PYTF RT C +++S++ L
Sbjct: 22 TSIPYTFLRTCCVNASKTSISFL 44
>AF026215-7|ABR92608.1| 554|Caenorhabditis elegans Hypothetical
protein F09G2.8b protein.
Length = 554
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +1
Query: 406 PNVARDGSITVNRHTVPLLKFQLKLVHGSKFLVMTT 513
P+VAR SI +NR + L FQ L S + MTT
Sbjct: 18 PSVARLESIVLNRRELLLDHFQYSLFQNSSEIPMTT 53
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 186 ILHGFPITSSISKYGSSCKV*HILLFFW 103
+ HGF + + I Y + + ++ LFFW
Sbjct: 58 VYHGFLVAAGIHNYQKAAPLIYVTLFFW 85
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 186 ILHGFPITSSISKYGSSCKV*HILLFFW 103
+ HGF + + I Y + + ++ LFFW
Sbjct: 58 VYHGFLVAAGIHNYQKAAPLIYVTLFFW 85
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -2
Query: 186 ILHGFPITSSISKYGSSCKV*HILLFFW 103
+ HGF + + I Y + + ++ LFFW
Sbjct: 58 VYHGFLVAAGIHNYQKAAPLIYVTLFFW 85
>Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical
protein T11G6.2b protein.
Length = 495
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 111 FFWKLSGFILGIDWPPTTSI 52
F W L+GFI + WP SI
Sbjct: 144 FLWILNGFIQSVGWPVEVSI 163
>Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical
protein T11G6.2a protein.
Length = 502
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 111 FFWKLSGFILGIDWPPTTSI 52
F W L+GFI + WP SI
Sbjct: 151 FLWILNGFIQSVGWPVEVSI 170
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = +1
Query: 208 VRKKVYGHDV*KCDA*IVQRVWNDMHEYLDDQPNWNAATLHL 333
+ ++++G ++ D+ + ++ + D+HE +D P T H+
Sbjct: 635 INERIFGSEIVLLDSSMSEKFYRDLHETVDCAPARTQLTAHI 676
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = +1
Query: 208 VRKKVYGHDV*KCDA*IVQRVWNDMHEYLDDQPNWNAATLHL 333
+ ++++G ++ D+ + ++ + D+HE +D P T H+
Sbjct: 676 INERIFGSEIVLLDSSMSEKFYRDLHETVDCAPARTQLTAHI 717
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = +1
Query: 208 VRKKVYGHDV*KCDA*IVQRVWNDMHEYLDDQPNWNAATLHL 333
+ ++++G ++ D+ + ++ + D+HE +D P T H+
Sbjct: 635 INERIFGSEIVLLDSSMSEKFYRDLHETVDCAPARTQLTAHI 676
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = +1
Query: 208 VRKKVYGHDV*KCDA*IVQRVWNDMHEYLDDQPNWNAATLHL 333
+ ++++G ++ D+ + ++ + D+HE +D P T H+
Sbjct: 676 INERIFGSEIVLLDSSMSEKFYRDLHETVDCAPARTQLTAHI 717
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,648,890
Number of Sequences: 27780
Number of extensions: 362422
Number of successful extensions: 989
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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