Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0140
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45) 29 2.2
SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09) 29 2.2
SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09) 28 5.1
SB_947| Best HMM Match : Phage_term_smal (HMM E-Value=2.8) 28 5.1
SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33) 28 6.8
SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13) 28 6.8
SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4) 28 6.8
SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_1692| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38) 27 9.0
SB_4089| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_24095| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)
Length = 2022
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 292 SGREHRTSHPLEAAADRRNPQVRRQGPHD 378
SG+ TSHPL + + + Q++RQ HD
Sbjct: 1862 SGQVCNTSHPLHSLQAKFDEQIKRQADHD 1890
>SB_48429| Best HMM Match : PI3_PI4_kinase (HMM E-Value=7.7e-09)
Length = 1423
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 292 SGREHRTSHPLEAAADRRNPQVRRQGPHD 378
SG+ TSHPL + + + Q++RQ HD
Sbjct: 250 SGQVCNTSHPLHSLQAKFDEQIKRQADHD 278
>SB_10901| Best HMM Match : SAM_1 (HMM E-Value=2.5e-09)
Length = 1472
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 313 SHPLEAAADRRNPQVRRQGPHDVSAQSFCSARTTPQRDYRPVP 441
SHPL NP+ + P S + TT QRD P P
Sbjct: 802 SHPLAPFTSESNPRPETKVPITTIGASTSAEVTTSQRDLMPSP 844
>SB_947| Best HMM Match : Phage_term_smal (HMM E-Value=2.8)
Length = 237
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ LP
Sbjct: 124 PQLVDGVLRVGGRIDKADLP 143
>SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33)
Length = 352
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLPRASAPP 406
PQL+DG+L+ G R+ +P + P
Sbjct: 220 PQLVDGVLRVGGRIDRADIPWETKHP 245
>SB_35583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLPRASAPP 406
PQL+DG+L+ G R+ +P + P
Sbjct: 727 PQLVDGVLRVGGRIDRADIPWETKHP 752
>SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13)
Length = 1012
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLPRASAPP 406
PQL+DG+L+ G R+ +P + P
Sbjct: 945 PQLVDGVLRVGGRIDRADIPWETKHP 970
>SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4)
Length = 281
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLPRASAPP 406
PQL+DG+L+ G R+ +P + P
Sbjct: 233 PQLVDGVLRVGGRIDRADIPWETKHP 258
>SB_40159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1497
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLPRASAPP 406
PQL+DG+L+ G R+ +P + P
Sbjct: 1144 PQLVDGVLRVGGRIDRADIPWETKHP 1169
>SB_1692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLPRASAPP 406
PQL+DG+L+ G R+ +P + P
Sbjct: 150 PQLVDGVLRVGGRIDRADIPWETKHP 175
>SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38)
Length = 525
Score = 27.5 bits (58), Expect = 9.0
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 244 SIGTRSPGRGELYNGYSGR-EHRTSHPLE-AAADRRNPQVRRQGPHDVSAQSFCSARTTP 417
S+ + SP +LY R + + S+P E R +VR Q A + R TP
Sbjct: 372 SVVSFSPRAAKLYTKTGQRYKQKHSYPAEIGVGSRMYLEVRVQSNDSKLAVAPLHCRATP 431
Query: 418 QRDYRPVPRHQF 453
Y +PR+ F
Sbjct: 432 TSGYEDMPRYVF 443
>SB_4089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ LP
Sbjct: 176 PQLVDGMLRVGGRIDRADLP 195
>SB_24095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 27.5 bits (58), Expect = 9.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 329 PQLIDGILKYGDRVHTMSLP 388
PQL+DG+L+ G R+ +P
Sbjct: 901 PQLVDGVLRVGGRIDRADIP 920
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,382,493
Number of Sequences: 59808
Number of extensions: 267473
Number of successful extensions: 782
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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