Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0135
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064593-1|AAH64593.1| 385|Homo sapiens DCP2 protein protein. 96 7e-20
AY146650-1|AAN62762.1| 420|Homo sapiens decapping enzyme hDcp2 ... 96 7e-20
AY135173-1|AAN08884.1| 420|Homo sapiens mRNA-decapping enzyme p... 96 7e-20
AK090564-1|BAC03479.1| 420|Homo sapiens protein ( Homo sapiens ... 96 1e-19
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 30 7.2
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 29 9.5
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 29 9.5
AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein pr... 29 9.5
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 29 9.5
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 29 9.5
>BC064593-1|AAH64593.1| 385|Homo sapiens DCP2 protein protein.
Length = 385
Score = 96.3 bits (229), Expect = 7e-20
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = +3
Query: 270 CGIREFAAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYW 449
CGIR+FA +F H P L ++ VLD W+EYK VPTYGAI +VLLVQ Y
Sbjct: 60 CGIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYL 119
Query: 450 TKASWGFPKGKVNEDEEP 503
K+ WGFPKGKVN++E P
Sbjct: 120 AKSGWGFPKGKVNKEEAP 137
Score = 79.4 bits (187), Expect = 9e-15
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = +1
Query: 112 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYY 240
IP +LDDLCSRFI+++P+E+R N +R+CFQIELAHWFYLD+Y
Sbjct: 8 IPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFY 50
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 446 LDKSLLGFP*REGQ*R*GALECATREVLEETGFDISNLINKN 571
L KS GFP + +CA REV EETGFDI + I K+
Sbjct: 119 LAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKD 160
>AY146650-1|AAN62762.1| 420|Homo sapiens decapping enzyme hDcp2
protein.
Length = 420
Score = 96.3 bits (229), Expect = 7e-20
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = +3
Query: 270 CGIREFAAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYW 449
CGIR+FA +F H P L ++ VLD W+EYK VPTYGAI +VLLVQ Y
Sbjct: 60 CGIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYL 119
Query: 450 TKASWGFPKGKVNEDEEP 503
K+ WGFPKGKVN++E P
Sbjct: 120 AKSGWGFPKGKVNKEEAP 137
Score = 79.4 bits (187), Expect = 9e-15
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = +1
Query: 112 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYY 240
IP +LDDLCSRFI+++P+E+R N +R+CFQIELAHWFYLD+Y
Sbjct: 8 IPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFY 50
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 446 LDKSLLGFP*REGQ*R*GALECATREVLEETGFDISNLINKN 571
L KS GFP + +CA REV EETGFDI + I K+
Sbjct: 119 LAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKD 160
>AY135173-1|AAN08884.1| 420|Homo sapiens mRNA-decapping enzyme
protein.
Length = 420
Score = 96.3 bits (229), Expect = 7e-20
Identities = 42/78 (53%), Positives = 51/78 (65%)
Frame = +3
Query: 270 CGIREFAAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYW 449
CGIR+FA +F H P L ++ VLD W+EYK VPTYGAI +VLLVQ Y
Sbjct: 60 CGIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAIILDETLENVLLVQGYL 119
Query: 450 TKASWGFPKGKVNEDEEP 503
K+ WGFPKGKVN++E P
Sbjct: 120 AKSGWGFPKGKVNKEEAP 137
Score = 79.4 bits (187), Expect = 9e-15
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = +1
Query: 112 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYY 240
IP +LDDLCSRFI+++P+E+R N +R+CFQIELAHWFYLD+Y
Sbjct: 8 IPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFY 50
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 446 LDKSLLGFP*REGQ*R*GALECATREVLEETGFDISNLINKN 571
L KS GFP + +CA REV EETGFDI + I K+
Sbjct: 119 LAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKD 160
>AK090564-1|BAC03479.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ33245 fis, clone ASTRO2004628, weakly similar to
PSU1 PROTEIN. ).
Length = 420
Score = 95.9 bits (228), Expect = 1e-19
Identities = 41/78 (52%), Positives = 51/78 (65%)
Frame = +3
Query: 270 CGIREFAAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAIXXXXXXSHVLLVQSYW 449
CGIR+FA +F H P L ++ VLD W+EYK VPTYGA+ +VLLVQ Y
Sbjct: 60 CGIRDFAKAVFSHCPFLLPQGEDVEKVLDEWKEYKMGVPTYGAVILDETLENVLLVQGYL 119
Query: 450 TKASWGFPKGKVNEDEEP 503
K+ WGFPKGKVN++E P
Sbjct: 120 AKSGWGFPKGKVNKEEAP 137
Score = 79.4 bits (187), Expect = 9e-15
Identities = 30/43 (69%), Positives = 39/43 (90%)
Frame = +1
Query: 112 IPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYY 240
IP +LDDLCSRFI+++P+E+R N +R+CFQIELAHWFYLD+Y
Sbjct: 8 IPGSVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFY 50
Score = 35.1 bits (77), Expect = 0.19
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 446 LDKSLLGFP*REGQ*R*GALECATREVLEETGFDISNLINKN 571
L KS GFP + +CA REV EETGFDI + I K+
Sbjct: 119 LAKSGWGFPKGKVNKEEAPHDCAAREVFEETGFDIKDYICKD 160
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 29.9 bits (64), Expect = 7.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 325 SRSCGTCWKICAANSLIPQGYTFLIRQCSNNPNKTNEP 212
SR C C++ +L+P G++ +C+N + +EP
Sbjct: 515 SRDCSVCFESEVIAALVPCGHSLFCMECANRICEKSEP 552
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 325 SRSCGTCWKICAANSLIPQGYTFLIRQCSNNPNKTNEP 212
SR C C++ +L+P G+ +C+N + +EP
Sbjct: 515 SRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEP 552
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 325 SRSCGTCWKICAANSLIPQGYTFLIRQCSNNPNKTNEP 212
SR C C++ +L+P G+ +C+N + +EP
Sbjct: 515 SRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEP 552
>AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein
protein.
Length = 266
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 325 SRSCGTCWKICAANSLIPQGYTFLIRQCSNNPNKTNEP 212
SR C C++ +L+P G+ +C+N + +EP
Sbjct: 212 SRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEP 249
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 325 SRSCGTCWKICAANSLIPQGYTFLIRQCSNNPNKTNEP 212
SR C C++ +L+P G+ +C+N + +EP
Sbjct: 515 SRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEP 552
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 29.5 bits (63), Expect = 9.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 325 SRSCGTCWKICAANSLIPQGYTFLIRQCSNNPNKTNEP 212
SR C C++ +L+P G+ +C+N + +EP
Sbjct: 447 SRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEP 484
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,148,195
Number of Sequences: 237096
Number of extensions: 1734582
Number of successful extensions: 2981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2981
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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