Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0135
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.0  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   4.0  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   4.0  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   5.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.2  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   9.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 34  QNIINGKTTDADMSSTIMNSSHNKHSIPIDILDD 135
           Q+I+N +T  +  SS+I +S  N    P   L+D
Sbjct: 362 QDILNLRTDISSSSSSISSSEENDFWQPKPTLED 395


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 597 VVCYGFYVTFLLIKLLISNPVSSRTSLVAHSR 502
           +VCYG +V F+ + L+I +      ++ AH +
Sbjct: 217 LVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEK 248


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 597 VVCYGFYVTFLLIKLLISNPVSSRTSLVAHSR 502
           +VCYG +V F+ + L+I +      ++ AH +
Sbjct: 93  LVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEK 124


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 200 KHILTRFPLSSAGRFIMKRLQRSSN 126
           KH + +  LS   RF+ +RL++ +N
Sbjct: 106 KHAVHKEQLSREQRFLRRRLEQLTN 130


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 348 VLDNWREYKQTVPTY 392
           +LD + +YK+ +P Y
Sbjct: 424 ILDYYHKYKENLPKY 438


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 348 VLDNWREYKQTVPTY 392
           +LD + +YK+ +P Y
Sbjct: 424 ILDYYHKYKENLPKY 438


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 348 VLDNWREYKQTVPTY 392
           +LD + +YK+ +P Y
Sbjct: 50  ILDYYHKYKENLPKY 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,741
Number of Sequences: 438
Number of extensions: 3430
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)