Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0131
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45330.1 68416.m04894 lectin protein kinase family protein co... 37 0.009
At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 33 0.11
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 0.44
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 1.8
At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit, c... 29 1.8
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 29 2.4
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 29 2.4
At2g17550.1 68415.m02031 expressed protein 29 2.4
At5g53210.1 68418.m06614 basic helix-loop-helix (bHLH) family pr... 29 3.1
At3g51290.1 68416.m05614 proline-rich family protein 29 3.1
At3g20310.1 68416.m02573 ethylene-responsive element-binding fam... 29 3.1
At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 28 4.1
At2g39220.1 68415.m04817 patatin family protein similar to patat... 28 4.1
At3g12200.1 68416.m01521 protein kinase family protein contains ... 28 5.4
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 27 7.2
At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 7.2
At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 27 7.2
At1g04150.1 68414.m00405 C2 domain-containing protein contains I... 27 7.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 9.5
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 9.5
>At3g45330.1 68416.m04894 lectin protein kinase family protein
contains Serine/Threonine protein kinases active-site
signature, Prosite:PS00108; contains Pfam profiles
PF00069: Protein kinase domain, PF00139: Legume lectins
beta domain, PF00138: Legume lectins alpha domain
Length = 682
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 211 VQEILKDMASQGDYAVKHQRWPKPPELSP---IYLPVSPVMPVQPLTSLTLTQTASGPET 381
+ E +M Y +HQR P+ +P + PV +P +TS ++T + SGP
Sbjct: 602 IPEARPNMEQVVQYINRHQRLPEFSPNTPGIGVSTPVLMGLPSLAITSSSVTSSVSGPSA 661
Query: 382 SPASDNLSVPSSDT 423
SP+S N S+ S T
Sbjct: 662 SPSSANNSMFISHT 675
>At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 478
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = -3
Query: 500 QGWSDRVSELTRVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRV 348
+G++DR+ E + + +D+ ++LSH S +G LS G S +++CV V
Sbjct: 326 EGFNDRIRESGMIVRDWVDQWEILSHESVKGF--LSHCGWNSAQESICVGV 374
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASGPETSPASDNLSVPSSDTWD 429
P PP SP P PV P+ P TS + T S E+ S + P+ D+ D
Sbjct: 811 PPPPVFSP---PPKPVTPLPPATSPMANAPTPSSSESGEISTPVQAPTPDSED 860
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Frame = +1
Query: 280 PPELSPIYLPVSPVM-----PVQPLTSLTLTQTASGPETSPASDNLSVP 411
PP SPIY P PV PV PL T + +S S +S P
Sbjct: 802 PPPPSPIYSPPPPVFSPPPKPVTPLPPATSPMANAPTPSSSESGEISTP 850
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 277 KPPELSPIYLPVSPVM---PVQPLTSLTLTQTASGPETSP 387
KPP SP+ P +P + PVQP T T P T+P
Sbjct: 132 KPPTTSPVKPPTTPPVQSPPVQPPTYKPPTSPVKPPTTTP 171
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +1
Query: 280 PPELSPIYLPVSP-VMP--VQPLTSLTLTQTASGPETSPASDNLSVP 411
PP P Y P +P V P VQP T T T P TSP + P
Sbjct: 100 PPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPP 146
>At2g29690.1 68415.m03609 anthranilate synthase, alpha subunit,
component I-2 (ASA2) identical to SP|P32069
Length = 621
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 196 IAILNVQEILKDMASQGDYAVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTL 354
++ +++ + D + AV H R P PP + P+S P P TSL L
Sbjct: 1 MSAVSISAVKSDFFTVEAIAVTHHRTPHPPHFPSLRFPLSLKSP--PATSLNL 51
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 414
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 414
P PP P+ P+ P P+ S T TAS + ++ L P+
Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 479 SELTRVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVR 351
+EL R +EL ++QV + V EE + + ++ PD V VR
Sbjct: 546 NELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588
>At5g53210.1 68418.m06614 basic helix-loop-helix (bHLH) family
protein contains similarity to helix-loop-helix
DNA-binding protein
Length = 294
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 136 GKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYAVKHQRWPKPPELSPIYLPVS 315
G +S+I +Y+ + + + L ++ K A V P PP LSP P+S
Sbjct: 134 GDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRPSPPVLSPRKPPLS 193
Query: 316 PV 321
P+
Sbjct: 194 PL 195
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 429
P PP P P P+ P T+ T T T+S P P S TWD
Sbjct: 74 PPPPPPRP---PPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTWD 122
>At3g20310.1 68416.m02573 ethylene-responsive element-binding family
protein similar to SP|O80339 Ethylene responsive element
binding factor 3 (AtERF3) {Arabidopsis thaliana};
contains Pfam profile PF00847: AP2 domain
Length = 244
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/66 (34%), Positives = 27/66 (40%)
Frame = +1
Query: 178 DDTDKSIAILNVQEILKDMASQGDYAVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLT 357
D KS L + D A D A ++ R PK PI SP P+QPLT L
Sbjct: 44 DPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPI--DCSPSSPLQPLTYLHNQ 101
Query: 358 QTASGP 375
S P
Sbjct: 102 NLCSPP 107
>At5g66640.1 68418.m08399 LIM domain-containing protein-related
contains low similarity to Pfam profile PF00412: LIM
domain
Length = 450
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 199 RCFC--QCHRRSPMHVRLRN*LFHHQCRVEFH 110
RC C CHR MH L+ FH C E++
Sbjct: 95 RCLCCFHCHRPFVMHEILKKGKFHIDCYKEYY 126
>At2g39220.1 68415.m04817 patatin family protein similar to
patatin-like latex allergen [Hevea
brasiliensis][PMID:10589016]; contains patatin domain
PF01734
Length = 499
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -1
Query: 403 RDCLKPAKFP--DLTPSV*ELMTLAAAQASPGIPADRWAIIPAVWA 272
+D LKP P DLT S L + A A + G W + A WA
Sbjct: 233 KDTLKPVLIPCYDLTSSAPFLFSRADALETDGYDFKLWEVCRATWA 278
>At3g12200.1 68416.m01521 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 571
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 289 LSPIYLPVSPVMPV 330
LSPIYLPV P+ PV
Sbjct: 283 LSPIYLPVFPIKPV 296
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 145 SSVISRAWDYVDDTDKSIAILNVQEILKDMASQGDYAVKH 264
S+V +A VD+ A ++V + KDM GD+ H
Sbjct: 328 SNVFHKACIEVDEEGTEAAAVSVASMTKDMLLMGDFVADH 367
>At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profiles PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase, PF01593: amine oxidase, flavin-containing
Length = 867
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 100 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 249
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNQAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative
/ CPA-FA synthase, putative similar to cyclopropane
synthase [Sterculia foetida] GI:21069167; contains Pfam
profile PF02353: Cyclopropane-fatty-acyl-phospholipid
synthase
Length = 867
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 100 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 249
YSD + DID + AW+++ T+K + + IL+++ +
Sbjct: 297 YSDIYLHHDIDLMPRNKAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346
>At1g04150.1 68414.m00405 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1012
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 100 YSDNEIPRDIDDGKASSVISRAWDYVD---DTDKSIAILNVQEILKDMASQGDYAVKHQR 270
+++ P ++D+ + SR +D V D +SIA VQ ++ DMASQG+
Sbjct: 888 HAETVFPDELDEEFDTFPTSRGFDVVRMRYDRVRSIAG-RVQTVVGDMASQGERVQALLS 946
Query: 271 WPKP 282
W P
Sbjct: 947 WRDP 950
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 482 VSELTRVDDELIDKIQVLSHVSEEGTERLSEA-GEVSGPDAVCVRVN 345
+SE +DKI L+ S E RL+EA E++ A+C R++
Sbjct: 138 ISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSRLS 184
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 274 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPAS 393
P P LSP P P PL+SL+ + + S P +SP+S
Sbjct: 58 PPPLSLSPSSPPPPPPSS-SPLSSLSPSLSPSPPSSSPSS 96
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,881,474
Number of Sequences: 28952
Number of extensions: 263864
Number of successful extensions: 1064
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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