Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0130
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 184 7e-47
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 183 9e-47
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 182 2e-46
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 180 8e-46
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 178 3e-45
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 177 4e-45
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 177 8e-45
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 175 2e-44
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 175 2e-44
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 97 1e-20
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 97 1e-20
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 96 2e-20
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 96 2e-20
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 96 2e-20
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 96 2e-20
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 94 9e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 69 2e-12
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 69 3e-12
At4g37190.1 68417.m05265 expressed protein 30 1.3
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 29 2.2
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.2
At2g26850.1 68415.m03221 F-box family protein contains Pfam PF00... 29 2.2
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 3.0
At2g35860.1 68415.m04403 beta-Ig-H3 domain-containing protein / ... 28 6.8
At2g46660.1 68415.m05822 cytochrome P450, putative similar to cy... 27 9.0
At1g69500.1 68414.m07986 cytochrome P450 family protein similar ... 27 9.0
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 9.0
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 9.0
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 184 bits (447), Expect = 7e-47
Identities = 90/129 (69%), Positives = 98/129 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVY+NEASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+DSVLDVVRKEAE CDC + F G K + R+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 166 TFSVFPSPK 174
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEVI EHGID TG GD+DLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL 44
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 183 bits (446), Expect = 9e-47
Identities = 89/129 (68%), Positives = 98/129 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEASGG+YVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 47 RINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 106
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+D+VLDVVRKEAE CDC + F G K + R+M
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 167 TFSVFPSPK 175
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/45 (82%), Positives = 41/45 (91%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD-SDLQL 254
MREI+HIQ GQCGNQIG+KFWEVI DEHGID+TG YSGD +DLQL
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQL 45
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 182 bits (443), Expect = 2e-46
Identities = 88/129 (68%), Positives = 98/129 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEASGG+YVPRAV++DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 47 RINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 106
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+D+VLDVVRKEAE CDC + F G K + R+M
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 167 TFSVFPSPK 175
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/45 (77%), Positives = 40/45 (88%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS-DLQL 254
MREI+H+Q GQCGNQIG+KFWEVI DEHG+D TG Y+GDS DLQL
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQL 45
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 180 bits (438), Expect = 8e-46
Identities = 88/129 (68%), Positives = 97/129 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
R+NVYYNEAS G+YVPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+DSVLDVVRKEAE CDC + F G K + R+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 166 TFSVFPSPK 174
Score = 80.6 bits (190), Expect = 9e-16
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIG+KFWEV++ EHGID TG Y GDS+LQL
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL 44
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 178 bits (433), Expect = 3e-45
Identities = 87/129 (67%), Positives = 97/129 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
R+NVYYNEAS G++VPRAV++DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+DSVLDVVRKEAE CDC + F G K + R+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 166 TFSVFPSPK 174
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID+TG Y G++DLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL 44
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 177 bits (432), Expect = 4e-45
Identities = 88/129 (68%), Positives = 97/129 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RI+VY+NEASGGKYVPRAV++DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+DSVLDVVRKEAE DC + F G K + R+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 166 TFSVFPSPK 174
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDS LQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL 44
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 177 bits (430), Expect = 8e-45
Identities = 85/129 (65%), Positives = 97/129 (75%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
R+NVYYNEAS G+YVPRA+++DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+D+VLDVVRKEAE CDC + F G K + R+M
Sbjct: 106 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 166 TFSVFPSPK 174
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIG+KFWEV+ DEHGID TG Y G+SDLQL
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQL 44
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 175 bits (426), Expect = 2e-44
Identities = 86/129 (66%), Positives = 96/129 (74%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+DSVLDVVRKEAE CDC + F G K + R+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 166 TFSVFPSPK 174
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL 44
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 175 bits (426), Expect = 2e-44
Identities = 86/129 (66%), Positives = 96/129 (74%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 436
RINVYYNEAS G++VPRAV++DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGH
Sbjct: 46 RINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGH 105
Query: 437 YTEGAELVDSVLDVVRKEAEGCDCCRVFS*LILWEEVLDLVWGLF*FPKSVKSIQIRIMN 616
YTEGAEL+DSVLDVVRKEAE CDC + F G K + R+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 617 TFSVVPSXK 643
TFSV PS K
Sbjct: 166 TFSVFPSPK 174
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQL 254
MREI+HIQ GQCGNQIGAKFWEV+ EHGID TG Y+GDSDLQL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL 44
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.7 bits (230), Expect = 1e-20
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD VRK A+ C
Sbjct: 110 VGKEIVDLCLDRVRKLADNC 129
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 96.7 bits (230), Expect = 1e-20
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD VRK A+ C
Sbjct: 110 VGKEIVDLCLDRVRKLADNC 129
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT 40
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 95.9 bits (228), Expect = 2e-20
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD LD +RK A+ C
Sbjct: 110 IGKEIVDLCLDRIRKLADNC 129
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 239
MRE + I GQ G Q+G WE+ EHGI G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSD 39
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.9 bits (223), Expect = 9e-20
Identities = 38/80 (47%), Positives = 58/80 (72%)
Frame = +2
Query: 263 NVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 442
N +++E S G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT
Sbjct: 50 NTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT 109
Query: 443 EGAELVDSVLDVVRKEAEGC 502
G E+VD+ L+ +RK A+ C
Sbjct: 110 VGREIVDTCLERLRKLADNC 129
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS 242
MREI+ I GQ G Q+G WE+ EHGI G DS
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDS 40
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAK 430
R +V++ +A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 47 RKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWAS 106
Query: 431 GHYTEGAELVDSVLDVVRKEAEGCDCCRVF 520
G Y +G + + ++D++ +EA+G D F
Sbjct: 107 G-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 RINVYYNEASGGKYVPRAVMVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAK 430
R +V++ +A Y+PRA+++DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 47 RKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWAS 106
Query: 431 GHYTEGAELVDSVLDVVRKEAEGCDCCRVF 520
G Y +G + + ++D++ +EA+G D F
Sbjct: 107 G-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 126 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 224
REI+ +Q GQCGNQIG +FW+ + EHGI G
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDG 35
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 123 MREIVHIQAGQCGNQIGAKFW 185
MREIV IQ G+ N +G+ FW
Sbjct: 1 MREIVTIQVGEFANFVGSHFW 21
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 129 EIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLNASMSTI 275
+I++ A + G+ GA FWEVIS + ++G S + L+ ST+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVIS-----EGMSNFAGPSSIILSDKSSTV 389
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 455 LVDSVLDVVRKEAEGCDCCRVF 520
+++SV VVRKEAE C+C +VF
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g26850.1 68415.m03221 F-box family protein contains Pfam
PF00646: F-box domain; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 371
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 185 PELCSDLIPALTRLDVDDFPHDCTKNLEPP 96
P+L S ++ ++ LD+ D P DC L PP
Sbjct: 50 PDLASPVLGKMSILDLPDLPLDCILELLPP 79
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 473 PVPNQPVQPPLCNVLSP-SYSPPQTVRRRSCPVGRFAQ---TARNGRSPWFQAQGPPSQL 306
P P+ P+ P L P S +PP S P+ T N RSP QGPP+
Sbjct: 54 PPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNTP 113
Query: 305 AGRT 294
+G T
Sbjct: 114 SGST 117
>At2g35860.1 68415.m04403 beta-Ig-H3 domain-containing protein /
fasciclin domain-containing protein contains Pfam
profile PF02469: Fasciclin domain
Length = 445
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 434 HYTEGAELVDSVLDV-VRKEAEGCDCCRVFS*L-ILWEEVLDLVWGLF*F-PKSVKSIQI 604
HYTE AELV+ L + +EA G +F+ E LD ++ F P+++KS+Q
Sbjct: 47 HYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQS 106
Query: 605 RIMNTFSVVPSXKGFPITVGRSHINATL 688
+M F ++P P SH + TL
Sbjct: 107 LLM--FHILPKRITSPQWPSLSHHHRTL 132
>At2g46660.1 68415.m05822 cytochrome P450, putative similar to
cytochrome p450 (CYP78A9)(GI:17065344) {Arabidopsis
thaliana}
Length = 530
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 527 LILWEEVLDLVWGLF*FPKSVKSIQIRIMNTFSVVPSXKGFPITVGRSHINATL 688
L LW WG + F + + T +V+P KGFP+ S +++TL
Sbjct: 41 LFLWTYPGGPAWGKYLFGRLISGSY----KTGNVIPGPKGFPLVGSMSLMSSTL 90
>At1g69500.1 68414.m07986 cytochrome P450 family protein similar to
Cytochrome P450 86A2 (SP:O23066) [Arabidopsis
thaliana]contains Pfam profile: PF00067: Cytochrome P450
Length = 478
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 476 HPVPNQPVQPPLCNVLSPSYSPPQTVRRRS 387
H VPN PV+ + +LS ++ TV RRS
Sbjct: 449 HLVPNHPVKYRMMTILSMAHGLKVTVSRRS 478
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 473 PVPNQPVQPPLCNVLSPSYSPP 408
PV +P PP SPSYSPP
Sbjct: 169 PVYTKPTLPPPVYKKSPSYSPP 190
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -3
Query: 414 PAPDCPKTKLSGRKICPNGPERTESMVPG-SRSTITARGT 298
PAP P L ICP+G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,927,438
Number of Sequences: 28952
Number of extensions: 352402
Number of successful extensions: 1208
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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