Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0129
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.2  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   4.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   4.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.3  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/18 (44%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = -1

Query: 59  CFFSNYIQYR--INQFSP 12
           C+++N+ QYR  I +F+P
Sbjct: 91  CYYTNWSQYRVKIGKFTP 108


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 507 PSWEPTVSSSICAGADAA 560
           PS+  T SS++ A  DAA
Sbjct: 29  PSFSSTASSALAAAVDAA 46


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 507 PSWEPTVSSSICAGADAA 560
           PS+  T SS++ A  DAA
Sbjct: 88  PSFSSTASSALAAAVDAA 105


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 507 PSWEPTVSSSICAGADAA 560
           PS+  T SS++ A  DAA
Sbjct: 29  PSFSSTASSALAAAVDAA 46


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 507 PSWEPTVSSSICAGADAA 560
           PS+  T SS++ A  DAA
Sbjct: 88  PSFSSTASSALAAAVDAA 105


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = -2

Query: 643 VPRKRQRRSDIYHGEGHRQP----SCSW-HQTFAASA 548
           +PRK  R  D++ G+G  Q      C W  Q+F + A
Sbjct: 456 LPRKLVRGQDVWLGKGAEQTRQILKCMWCGQSFRSLA 492


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,379
Number of Sequences: 336
Number of extensions: 4052
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)