Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0129
(698 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 164 6e-41
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 164 6e-41
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 164 6e-41
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 164 6e-41
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 162 2e-40
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 161 3e-40
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 161 3e-40
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 158 3e-39
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 158 3e-39
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 102 3e-22
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 99 2e-21
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 99 2e-21
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 99 2e-21
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 99 2e-21
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 99 2e-21
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 99 2e-21
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 81 9e-16
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 80 1e-15
At3g51650.1 68416.m05664 expressed protein 32 0.32
At3g51640.1 68416.m05663 expressed protein 31 0.73
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 30 1.3
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 30 1.3
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.3
At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C) 29 2.2
At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) simila... 29 2.2
At1g58983.1 68414.m06666 40S ribosomal protein S2, putative simi... 29 2.2
At1g58684.1 68414.m06657 40S ribosomal protein S2, putative 29 2.2
At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) simila... 29 2.2
At3g14310.1 68416.m01810 pectinesterase family protein contains ... 29 3.0
At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S ri... 29 3.9
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI... 28 5.2
At5g60900.1 68418.m07640 lectin protein kinase family protein co... 28 6.8
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 28 6.8
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 28 6.8
At3g16470.1 68416.m02101 jacalin lectin family protein contains ... 27 9.0
At1g58227.1 68414.m06616 hypothetical protein 27 9.0
At1g06590.1 68414.m00698 expressed protein 27 9.0
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 164 bits (398), Expect = 6e-41
Identities = 73/89 (82%), Positives = 81/89 (91%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Score = 121 bits (292), Expect = 4e-28
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+DSVLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSV 189
Score = 102 bits (244), Expect = 3e-22
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQYR+L+VPELTQQM+D+KNMM A DPRHGRYL +A+F G+MS K DE
Sbjct: 269 GFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328
Query: 670 QMLNIQDQN 696
QMLN+Q++N
Sbjct: 329 QMLNVQNKN 337
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 164 bits (398), Expect = 6e-41
Identities = 73/89 (82%), Positives = 81/89 (91%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Score = 121 bits (292), Expect = 4e-28
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+DSVLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSV 189
Score = 102 bits (244), Expect = 3e-22
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQYR+L+VPELTQQM+D+KNMM A DPRHGRYL +A+F G+MS K DE
Sbjct: 269 GFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328
Query: 670 QMLNIQDQN 696
QMLN+Q++N
Sbjct: 329 QMLNVQNKN 337
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 164 bits (398), Expect = 6e-41
Identities = 73/89 (82%), Positives = 81/89 (91%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Score = 121 bits (292), Expect = 4e-28
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+DSVLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSV 189
Score = 103 bits (248), Expect = 9e-23
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYL +A+F G+MS K DE
Sbjct: 269 GFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328
Query: 670 QMLNIQDQN 696
QM+N+Q++N
Sbjct: 329 QMINVQNKN 337
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 164 bits (398), Expect = 6e-41
Identities = 73/89 (82%), Positives = 81/89 (91%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Score = 120 bits (289), Expect = 9e-28
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+D+VLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 106 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 165
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSV 189
Score = 102 bits (245), Expect = 2e-22
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQYRAL+VPELTQQM+D+KNMM A DPRHGRYL +A+F G+MS K DE
Sbjct: 269 GFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328
Query: 670 QMLNIQDQN 696
QM+N+Q++N
Sbjct: 329 QMINVQNKN 337
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 162 bits (394), Expect = 2e-40
Identities = 72/89 (80%), Positives = 81/89 (91%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+SATMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Score = 122 bits (293), Expect = 3e-28
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+DSVLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSV 189
Score = 102 bits (244), Expect = 3e-22
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQYR L+VPELTQQM+DAKNMM A DPRHGRYL +A+F G+MS K DE
Sbjct: 269 GFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 328
Query: 670 QMLNIQDQN 696
QMLN+Q++N
Sbjct: 329 QMLNVQNKN 337
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 161 bits (392), Expect = 3e-40
Identities = 72/89 (80%), Positives = 79/89 (88%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKL PT+GDLNHL+SATMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Score = 118 bits (283), Expect = 5e-27
Identities = 59/84 (70%), Positives = 61/84 (72%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+DSVLDVVRKEAE DCLQGFQ KIREEYPDR+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSV 189
Score = 103 bits (246), Expect = 2e-22
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQY ALSVPELTQQM+DAKNMM A DPRHGRYL +AVF G++S K DE
Sbjct: 269 GFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKLSTKEVDE 328
Query: 670 QMLNIQDQN 696
QM+NIQ++N
Sbjct: 329 QMMNIQNKN 337
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 161 bits (392), Expect = 3e-40
Identities = 72/89 (80%), Positives = 79/89 (88%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKL PT+GDLNHL+SATMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 278
Score = 122 bits (293), Expect = 3e-28
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+DSVLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 106 YTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMM 165
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 166 TFSVFPSPKVSDTVVEPYNATLSV 189
Score = 103 bits (248), Expect = 9e-23
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQY ALSVPELTQQM+DAKNMM A DPRHGRYL +AVF G+MS K DE
Sbjct: 269 GFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDE 328
Query: 670 QMLNIQDQN 696
QM+N+Q++N
Sbjct: 329 QMMNVQNKN 337
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 158 bits (384), Expect = 3e-39
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+SATMSGVT LRFPGQLN+D
Sbjct: 191 HQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSD 250
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 251 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 279
Score = 120 bits (289), Expect = 9e-28
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+D+VLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 167 TFSVFPSPKVSDTVVEPYNATLSV 190
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQY +L+VPELTQQM+DAKNMM A DPRHGRYL +A+F G+MS K DE
Sbjct: 270 GFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDE 329
Query: 670 QMLNIQDQN 696
Q+LN+Q++N
Sbjct: 330 QILNVQNKN 338
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 158 bits (384), Expect = 3e-39
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 433
HQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+SATMSGVT LRFPGQLN+D
Sbjct: 191 HQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSD 250
Query: 434 LRKLAVNMVPFPRLHFFMPGFAPLTLVGA 520
LRKLAVN++PFPRLHFFM GFAPLT G+
Sbjct: 251 LRKLAVNLIPFPRLHFFMVGFAPLTSRGS 279
Score = 120 bits (289), Expect = 9e-28
Identities = 59/84 (70%), Positives = 62/84 (73%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YTEGAEL+D+VLDVVRKEAE CDCLQGFQ KIREEYPDR+M
Sbjct: 107 YTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMML 166
Query: 183 TFSVVPSPKVSDTVVEPYNATLSV 254
TFSV PSPKVSDTVVEPYNATLSV
Sbjct: 167 TFSVFPSPKVSDTVVEPYNATLSV 190
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +1
Query: 490 GLCTIDPRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAGRMSMKGXDE 669
G + RGSQQY +L+VPELTQQM+D+KNMM A DPRHGRYL +A+F G+MS K DE
Sbjct: 270 GFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDE 329
Query: 670 QMLNIQDQN 696
Q+LNIQ++N
Sbjct: 330 QILNIQNKN 338
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 102 bits (244), Expect = 3e-22
Identities = 41/85 (48%), Positives = 61/85 (71%)
Frame = +2
Query: 251 SHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 430
+H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S T+S +TT LRF G +N
Sbjct: 191 THSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINV 250
Query: 431 DLRKLAVNMVPFPRLHFFMPGFAPL 505
D+ + N+VP+PR+HF + +AP+
Sbjct: 251 DITEFQTNLVPYPRIHFMLSSYAPV 275
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YT G E+VD+ L+ +RK A+ C LQGF ++ ++ +
Sbjct: 108 YTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKL 167
Query: 183 TFSVVPSPKVSDTVVEPYNATLS 251
F++ PSP+VS VVEPYN+ LS
Sbjct: 168 GFTIYPSPQVSTAVVEPYNSVLS 190
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 526 YRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAG 642
+ SVPE+T +F+ NMMA CDPRHG+Y+ ++ G
Sbjct: 283 HEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRG 321
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 99.1 bits (236), Expect = 2e-21
Identities = 40/85 (47%), Positives = 60/85 (70%)
Frame = +2
Query: 251 SHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 430
+H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N
Sbjct: 191 THSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINV 250
Query: 431 DLRKLAVNMVPFPRLHFFMPGFAPL 505
D+ + N+VP+PR+HF + +AP+
Sbjct: 251 DITEFQTNLVPYPRIHFMLSSYAPV 275
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 42/83 (50%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YT G E+VD LD VRK A+ C LQGF ++ +Y +
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 183 TFSVVPSPKVSDTVVEPYNATLS 251
F++ PSP+VS VVEPYN+ LS
Sbjct: 168 GFTIYPSPQVSTAVVEPYNSVLS 190
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 526 YRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAG 642
+ LSVPE+T +F+ +MMA CDPRHG+Y+ ++ G
Sbjct: 283 HEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRG 321
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 99.1 bits (236), Expect = 2e-21
Identities = 40/85 (47%), Positives = 60/85 (70%)
Frame = +2
Query: 251 SHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 430
+H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N
Sbjct: 191 THSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINV 250
Query: 431 DLRKLAVNMVPFPRLHFFMPGFAPL 505
D+ + N+VP+PR+HF + +AP+
Sbjct: 251 DITEFQTNLVPYPRIHFMLSSYAPV 275
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 42/83 (50%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YT G E+VD LD VRK A+ C LQGF ++ +Y +
Sbjct: 108 YTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 183 TFSVVPSPKVSDTVVEPYNATLS 251
F++ PSP+VS VVEPYN+ LS
Sbjct: 168 GFTIYPSPQVSTAVVEPYNSVLS 190
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 526 YRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAG 642
+ LSVPE+T +F+ +MMA CDPRHG+Y+ ++ G
Sbjct: 283 HEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRG 321
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +2
Query: 251 SHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 430
+H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN
Sbjct: 191 THSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
Query: 431 DLRKLAVNMVPFPRLHFFMPGFAPL 505
D+ + N+VP+PR+HF + +AP+
Sbjct: 251 DVTEFQTNLVPYPRIHFMLSSYAPV 275
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YT G E+VD LD +RK A+ C LQGF ++ +Y +
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 183 TFSVVPSPKVSDTVVEPYNATLS 251
F+V PSP+VS +VVEPYN+ LS
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLS 190
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 526 YRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAG 642
+ LSV E+T F+ +MMA CDPRHG+Y+ ++ G
Sbjct: 283 HEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRG 321
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +2
Query: 251 SHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 430
+H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN
Sbjct: 191 THSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
Query: 431 DLRKLAVNMVPFPRLHFFMPGFAPL 505
D+ + N+VP+PR+HF + +AP+
Sbjct: 251 DVTEFQTNLVPYPRIHFMLSSYAPV 275
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YT G E+VD LD +RK A+ C LQGF ++ +Y +
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 183 TFSVVPSPKVSDTVVEPYNATLS 251
F+V PSP+VS +VVEPYN+ LS
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLS 190
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 526 YRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAG 642
+ LSV E+T F+ +MMA CDPRHG+Y+ ++ G
Sbjct: 283 HEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRG 321
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +2
Query: 251 SHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 430
+H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN
Sbjct: 191 THSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
Query: 431 DLRKLAVNMVPFPRLHFFMPGFAPL 505
D+ + N+VP+PR+HF + +AP+
Sbjct: 251 DVTEFQTNLVPYPRIHFMLSSYAPV 275
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YT G E+VD LD +RK A+ C LQGF ++ +Y +
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 183 TFSVVPSPKVSDTVVEPYNATLS 251
F+V PSP+VS +VVEPYN+ LS
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLS 190
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 526 YRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAG 642
+ LSV E+T F+ +MMA CDPRHG+Y+ ++ G
Sbjct: 283 HEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRG 321
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +2
Query: 251 SHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 430
+H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN
Sbjct: 191 THSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNV 250
Query: 431 DLRKLAVNMVPFPRLHFFMPGFAPL 505
D+ + N+VP+PR+HF + +AP+
Sbjct: 251 DVTEFQTNLVPYPRIHFMLSSYAPV 275
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 43/83 (51%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
YT G E+VD LD +RK A+ C LQGF ++ +Y +
Sbjct: 108 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
Query: 183 TFSVVPSPKVSDTVVEPYNATLS 251
F+V PSP+VS +VVEPYN+ LS
Sbjct: 168 GFTVYPSPQVSTSVVEPYNSVLS 190
Score = 44.8 bits (101), Expect = 6e-05
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 526 YRALSVPELTQQMFDAKNMMAACDPRHGRYLXVAAVFAG 642
+ LSV E+T F+ +MMA CDPRHG+Y+ ++ G
Sbjct: 283 HEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRG 321
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = +2
Query: 257 QLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADL 436
+L N D +DN AL I L LT PT+ N LVS MS TT LR+PG +N DL
Sbjct: 194 RLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
Query: 437 RKLAVNMVPFPRLHFFMPGFAPLTL 511
L +++P PR HF M G+ PLT+
Sbjct: 254 VGLLASLIPTPRCHFLMTGYTPLTV 278
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
Y +G + + ++D++ +EA+G D L+GF + + Y +++
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQ 167
Query: 183 TFSVVPSP-KVSDTVVEPYNATLSV 254
T+SV P+ + SD VV+PYN+ L++
Sbjct: 168 TYSVFPNQMETSDVVVQPYNSLLTL 192
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/85 (45%), Positives = 49/85 (57%)
Frame = +2
Query: 257 QLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADL 436
+L N D +DN AL I L LT PT+ N LVS MS TT LR+PG +N DL
Sbjct: 194 RLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
Query: 437 RKLAVNMVPFPRLHFFMPGFAPLTL 511
L +++P PR HF M G+ PLT+
Sbjct: 254 VGLLASLIPTPRCHFLMTGYTPLTV 278
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 YTEGAELVDSVLDVVRKEAEGCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMN 182
Y +G + + ++D++ +EA+G D L+GF + + Y +++
Sbjct: 108 YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQ 167
Query: 183 TFSVVPSP-KVSDTVVEPYNATLSV 254
T+SV P+ + SD VV+PYN+ L++
Sbjct: 168 TYSVFPNQMETSDVVVQPYNSLLTL 192
>At3g51650.1 68416.m05664 expressed protein
Length = 826
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -2
Query: 646 SVPRKRQRRSD---IYHGEGHRQPSCSWHQTFAASAPAQI 536
SVP + +R ++ + + R+P SWHQ FA S PA +
Sbjct: 464 SVPNEEERNTNNPVVSEPKPSREPRKSWHQLFARSTPAPV 503
>At3g51640.1 68416.m05663 expressed protein
Length = 826
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -2
Query: 643 VPRKRQRRSD---IYHGEGHRQPSCSWHQTFAASAPAQI 536
VP + +R ++ + + R+P SWHQ FA S PA +
Sbjct: 465 VPNEEERNTNNPVVSEPKPSREPKKSWHQLFARSTPAPV 503
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +2
Query: 260 LVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG-QLN--- 427
LVE + ++N DIC+ + PT +L LVS + G + RFP N
Sbjct: 823 LVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDISTNIKY 882
Query: 428 ADLRKLAVNMVPFPRLHFFMPGFAPLTLVGANSIE 532
DL + + VP+ +FF LT+ G ++
Sbjct: 883 LDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELK 915
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +2
Query: 260 LVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPG-QLN--- 427
LVE + ++N DIC+ + PT +L LVS + G + RFP N
Sbjct: 784 LVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFPDISTNIKY 843
Query: 428 ADLRKLAVNMVPFPRLHFFMPGFAPLTLVGANSIE 532
DL + + VP+ +FF LT+ G ++
Sbjct: 844 LDLDQTGIEEVPWQIENFF--NLTKLTMKGCRELK 876
>At2g31580.1 68415.m03858 expressed protein contains Pfam
profile: PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 21 LVDSVLDVVRKEAEGCDCLQGF 86
+++SV VVRKEAE C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
Length = 285
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 459 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVGVVSFKVLKQIS 310
T +F K+ F C +TP+ ET++ +SPY F K +S
Sbjct: 224 TKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLASKALS 273
>At1g59359.1 68414.m06677 40S ribosomal protein S2 (RPS2B) similar
to ribosomal protein S2 GI:430711 from [Drosophila
melanogaster]
Length = 284
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 459 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVGVVSFKVLKQIS 310
T +F K+ F C +TP+ ET++ +SPY F K +S
Sbjct: 223 TKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVS 272
>At1g58983.1 68414.m06666 40S ribosomal protein S2, putative similar
to ribosomal protein S2 GI:939717 from [Urechis caupo]
Length = 284
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 459 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVGVVSFKVLKQIS 310
T +F K+ F C +TP+ ET++ +SPY F K +S
Sbjct: 223 TKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVS 272
>At1g58684.1 68414.m06657 40S ribosomal protein S2, putative
Length = 284
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 459 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVGVVSFKVLKQIS 310
T +F K+ F C +TP+ ET++ +SPY F K +S
Sbjct: 223 TKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVS 272
>At1g58380.1 68414.m06642 40S ribosomal protein S2 (RPS2A) similar
to ribosomal protein S2 GI:939717 from (Urechis caupo)
Length = 284
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -3
Query: 459 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVGVVSFKVLKQIS 310
T +F K+ F C +TP+ ET++ +SPY F K +S
Sbjct: 223 TKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLSTKAVS 272
>At3g14310.1 68416.m01810 pectinesterase family protein contains
Pfam profiles: PF01095 pectinesterase, PF04043 plant
invertase/pectin methylesterase inhibitor ;similar to
pectin methylesterase GB:Q42534 from [Arabidopsis
thaliana]
Length = 592
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 HQLVENTDETYCIDNEALYDI-CFRTLKLTTPTYGDLNHLVSATMSGVTTCL 406
H +E DET +E + D+ + T K GDL L+S+ ++ TCL
Sbjct: 128 HDCLETIDETLDELHETVEDLHLYPTKKTLREHAGDLKTLISSAITNQETCL 179
>At3g57490.1 68416.m06400 40S ribosomal protein S2 (RPS2D) 40S
ribosomal protein S2 - Arabidopsis thaliana,
SWISSPROT:RS2_ARATH
Length = 276
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 459 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 349
T +F K+ F C +TP+ ET++ KSPY
Sbjct: 215 TKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSKSPY 251
>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
GI:5566292 from [Drosophila melanogaster]; contains
prosite evidence: PS00383: Tyrosine specific protein
phosphatases active site
Length = 632
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 408 RKHVVTPDIVAETKWFKSPYVGVVSFKV 325
+KH T D+ E W K+P GVV F +
Sbjct: 409 KKHQKTKDLGPEDFWIKAPKKGVVVFAI 436
>At5g60900.1 68418.m07640 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 748
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 370 GFSDNVWCDHVLAIPRTTERRFAETS-G*HGSISEVTLLY-AGLCTIDPRGSQQYRALSV 543
GF+ ++W D + + T+ G + S+VTL GL DPRG + +RALS
Sbjct: 69 GFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALSG 128
Query: 544 PELTQQMF 567
+++ F
Sbjct: 129 GSVSRGRF 136
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites
at intron 18
Length = 1606
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 371 VSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTLVGANSIELY 538
+S T+ G R P ++ DL+K VN+ PRL +A L+ A +I Y
Sbjct: 134 MSVTVVGTVEGGRAPTKIKTDLKKPIVNIACHPRLPVLYVAYAE-GLIRAYNIHTY 188
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta repeat;
similar to Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]
Length = 1216
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 134 SFDFQNP*RVSRSYYEYVFRGTKSKGFRYC 223
++DF+NP V S Y ++RG K YC
Sbjct: 1151 NYDFRNPFVVCGSTYVPIYRGQKDVSCPYC 1180
>At3g16470.1 68416.m02101 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase-binding protein homolog
[Arabidopsis thaliana] GI:2997767
Length = 451
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +2
Query: 275 DETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVN 454
D+ + +D A+ + F+T K T+ YG + F GQ L KL VN
Sbjct: 386 DKIFSVDAPAIVSLKFKTNKRTSIPYGLEGGTEFVLEKKDHKIVGFYGQAGEYLYKLGVN 445
Query: 455 MVPFPR 472
+ P +
Sbjct: 446 VAPIAK 451
>At1g58227.1 68414.m06616 hypothetical protein
Length = 1323
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 298 IVYTIRLISVFYQLVTDSVALYGSTTVSETFGLGTTENV 182
I+Y + ISVF+ L+T S T ET + T E +
Sbjct: 717 IIYCVGGISVFFPLITQSDRCESETLNEETSAMPTKERM 755
>At1g06590.1 68414.m00698 expressed protein
Length = 916
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 413 GIASTWSHQTLSLKPNGSSPHTLGLLASKS*SRYRKAPHCLYNTSHQCFLPI 258
G+AST + LK S LLA+K S+ H L+ T H+ L I
Sbjct: 690 GLASTAMGVDMELKVEASLREARTLLAAKQYSQAANVAHSLFCTCHKFNLQI 741
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,898,036
Number of Sequences: 28952
Number of extensions: 348961
Number of successful extensions: 999
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -