Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0118
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...   111   1e-23
UniRef50_A6FPH5 Cluster: Membrane protein-like protein; n=1; Ros...    37   0.55 
UniRef50_Q5YYK8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score =  111 bits (268), Expect = 1e-23
 Identities = 55/113 (48%), Positives = 72/113 (63%)
 Frame = +1

Query: 259  SLCHSSLGADRVSKLLLDVSPTKFVFLAQTPFVKVIDLEGTVDVQSKAKTQQAKLRFKLL 438
            SLCHS+LG DRV+K++ + +P    FLA TPFVK ID+EG+ +V  + +TQQ   R  LL
Sbjct: 2242 SLCHSALGTDRVAKVMFETTPNSVKFLADTPFVKAIDVEGSFNVNQQQRTQQCLFRICLL 2301

Query: 439  EGKEVSVQALAKDFQYXXXXXXXXXASSLSSVIWVPEKRVDITADIILSGDQE 597
            EGK V + AL KD+QY                  +PEKRVDI+ DIILSGD++
Sbjct: 2302 EGKPVQMSALVKDYQYYEFTTEESNRKLSYVGHLIPEKRVDISTDIILSGDKK 2354



 Score =  102 bits (244), Expect = 1e-20
 Identities = 44/83 (53%), Positives = 61/83 (73%)
 Frame = +2

Query: 5    TVTYPTSSDSPYIFSGEACLDLDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFFHPRLD 184
            T+T+PTS D P+   GEACLDLDK + GHKTS R+L++ SN+ +++   AEIGFFHP+++
Sbjct: 2157 TLTHPTSQDLPFPIKGEACLDLDKNRPGHKTSARFLVDYSNSGSEDKAVAEIGFFHPKIE 2216

Query: 185  KEVVIKSNAVFKVPEPNRYILES 253
            KE VI+ NA  K PE   + +ES
Sbjct: 2217 KEAVIRLNAFMKRPENGCFKIES 2239



 Score = 42.3 bits (95), Expect = 0.011
 Identities = 30/63 (47%), Positives = 35/63 (55%)
 Frame = +3

Query: 510  DRKLSIVGHLGPGKESRYNR*YHPIW*PRKTSPTGHFSCKINLVKSDYGLSKENFQLISL 689
            +RKLS VGHL P K    +     +   +K    G    + NLVKSDYGLSKENF    L
Sbjct: 2326 NRKLSYVGHLIPEKRVDISTDII-LSGDKKNIAHGALFLQDNLVKSDYGLSKENFNYF-L 2383

Query: 690  NAL 698
            NAL
Sbjct: 2384 NAL 2386


>UniRef50_A6FPH5 Cluster: Membrane protein-like protein; n=1;
           Roseobacter sp. AzwK-3b|Rep: Membrane protein-like
           protein - Roseobacter sp. AzwK-3b
          Length = 166

 Score = 36.7 bits (81), Expect = 0.55
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = -1

Query: 593 WSPDRMISAV-ISTLFSGTQMTDDRELAVSSSVVNSKYWKSFARAWTLTSLPSRSLN 426
           +SP  ++SA+ + TL+ GT+    R++A   +   S YW     A   T LP R+LN
Sbjct: 70  FSPIHLLSALTLWTLWVGTRAAIRRDIAAHQTAFRSLYWYGVILAGLFTFLPGRTLN 126


>UniRef50_Q5YYK8 Cluster: Putative uncharacterized protein; n=1;
           Nocardia farcinica|Rep: Putative uncharacterized protein
           - Nocardia farcinica
          Length = 120

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 481 GSLSPEPGR*PPCPLEA*TS-TWPAGSSPCFA 389
           G+++P  G   PCPL+     TWPAG+ P +A
Sbjct: 8   GTMAPVTGAPEPCPLDCLVEITWPAGARPWWA 39


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,169,575
Number of Sequences: 1657284
Number of extensions: 14727364
Number of successful extensions: 37607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37597
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)