Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0118
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.2  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.2  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 27  VTLRIYSAERPASTWIRRNRDTR 95
           VT    S  +P STW+ RN DTR
Sbjct: 233 VTFASSSIAQP-STWLVRNTDTR 254


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/67 (20%), Positives = 26/67 (38%)
 Frame = -1

Query: 608 GRCFSWSPDRMISAVISTLFSGTQMTDDRELAVSSSVVNSKYWKSFARAWTLTSLPSRSL 429
           G    WS  R + AV  T      MTD     V ++++  K++           +P+ + 
Sbjct: 258 GIVMEWSNSRELLAVAGTELGSPHMTDIHGATVYNNLL--KFYTESGNLLYTAKIPNSTY 315

Query: 428 NLNLACW 408
            ++   W
Sbjct: 316 PVSALTW 322


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 44  IYTESHCWLGT 12
           IY+++ CWLGT
Sbjct: 446 IYSQTLCWLGT 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,351
Number of Sequences: 2352
Number of extensions: 13524
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)