Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0116
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...   125   7e-28
UniRef50_A2DPG0 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score =  125 bits (302), Expect = 7e-28
 Identities = 76/191 (39%), Positives = 106/191 (55%), Gaps = 2/191 (1%)
 Frame = +2

Query: 5    TVTYPTSSDSPYIFSGEACLDLDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFFHPRLD 184
            T+T+PTS D P+   GEACLDLDK + GHKTS R+L++ SN+ +++   AEIGFFHP+++
Sbjct: 2157 TLTHPTSQDLPFPIKGEACLDLDKNRPGHKTSARFLVDYSNSGSEDKAVAEIGFFHPKIE 2216

Query: 185  KEVVIKSNAVFKVPEPNRYILES*SAYVTPLSALIASPNCC*MFH-QPNSFSW-PKHXL* 358
            KE VI+ NA  K PE   + +ES SA +   SAL        MF   PNS  +       
Sbjct: 2217 KEAVIRLNAFMKRPENGCFKIES-SASLCH-SALGTDRVAKVMFETTPNSVKFLADTPFV 2274

Query: 359  RL*T*KEQWTCKARRRPSRAKLRFKLLEGKEVSVQALAKDFQYFEFTNRRGRPQALYRRV 538
            +    +  +    ++R  +   R  LLEGK V + AL KD+QY+EFT      +  Y   
Sbjct: 2275 KAIDVEGSFNVNQQQRTQQCLFRICLLEGKPVQMSALVKDYQYYEFTTEESNRKLSYVGH 2334

Query: 539  ICXRKRE*IIT 571
            +   KR  I T
Sbjct: 2335 LIPEKRVDIST 2345


>UniRef50_A2DPG0 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1122

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +2

Query: 41   IFSGEACLD-LDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFFHPRLDKEVVIKSNAVF 217
            +FS + C+D L+KK Q H+ S  +  N SN ++ + I   I     +  KE+ I++++  
Sbjct: 780  LFSQD-CIDKLNKKPQKHQVSQPHGKN-SNPKSIQRIKDRISDQKFQSQKEITIETDSYI 837

Query: 218  KVPEPNRYILES*SAYVTPLSALIASPN 301
             +P      L S  + +TP  A   +PN
Sbjct: 838  NIPIEKSNSLTSFDSILTPPPAFGNNPN 865


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,924,706
Number of Sequences: 1657284
Number of extensions: 11389096
Number of successful extensions: 28927
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28921
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)