Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0116
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   1.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   5.7  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.5  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 565 NLLSFPGTNDPTIESLRSAS 506
           N+LSF G   PT++ L  AS
Sbjct: 145 NILSFQGNQRPTLDELHDAS 164


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 27  VTLRIYSAERPASTWIRRNRDTR 95
           VT    S  +P STW+ RN DTR
Sbjct: 233 VTFASSSIAQP-STWLVRNTDTR 254


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 44  IYTESHCWLGT 12
           IY+++ CWLGT
Sbjct: 446 IYSQTLCWLGT 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,499
Number of Sequences: 2352
Number of extensions: 10361
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)