Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0114
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0035 - 9896289-9896390,9897394-9897503,9897587-9897715,989... 31 0.39
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 31 0.68
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 31 0.68
06_03_1036 + 27053480-27053729,27054616-27054704,27054881-270549... 30 1.2
08_02_0645 - 19666189-19666209,19666330-19666437,19667041-196671... 29 1.6
06_01_0393 + 2831676-2831876,2831986-2832101,2832340-2832421,283... 28 3.6
04_03_0218 + 12780061-12780150,12780864-12781394 28 3.6
12_01_1066 - 10998305-10998473,10998759-10998910,10999051-109992... 28 4.8
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 4.8
03_04_0237 - 19201789-19202421 28 4.8
03_02_0917 + 12372122-12372422,12372487-12372524,12373103-123731... 28 4.8
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 27 6.3
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 27 6.3
02_05_0427 + 28893726-28893930,28895164-28895210 27 6.3
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 27 6.3
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 27 6.3
10_08_0785 - 20536265-20537032 27 8.4
07_03_1693 - 28756331-28756435,28756558-28756664,28757114-287572... 27 8.4
03_02_0169 - 6099621-6099663,6099794-6099915,6100020-6100115,610... 27 8.4
>10_06_0035 -
9896289-9896390,9897394-9897503,9897587-9897715,
9898734-9898800,9898888-9898970,9899878-9899959,
9900049-9900125,9900206-9900289,9900368-9900437,
9900580-9900668,9900921-9901613,9902833-9903142
Length = 631
Score = 31.5 bits (68), Expect = 0.39
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV + +++ +PW W D+ T RC ++D KY
Sbjct: 288 QLCVFQVAKESKKPWIWW-DYVTDFHIRCPMKDKKY 322
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K +++ +PW W D+ T RC +++ KY
Sbjct: 288 QVCVYKVAKEHGKPWL-WWDYVTDFAIRCPMKEKKY 322
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV K +++ +PW W D+ T RC +++ KY
Sbjct: 288 QVCVYKVAKEHGKPWL-WWDYVTDFAIRCPMKEKKY 322
>06_03_1036 +
27053480-27053729,27054616-27054704,27054881-27054950,
27055145-27055228,27055332-27055408,27055519-27055583,
27055723-27055765,27055889-27055952,27056126-27056254,
27056522-27056625,27056724-27056828
Length = 359
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q CV + + + +PW W D+ ++ RC +++ KY
Sbjct: 31 QLCVHRVANETGRPWAWW-DYVMDYKIRCSMKEKKY 65
>08_02_0645 -
19666189-19666209,19666330-19666437,19667041-19667152,
19667321-19667417,19667809-19667911,19668071-19668152,
19668519-19668665,19668763-19668863,19669037-19669231
Length = 321
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 159 ERLPAVARVVGSLHVPPLQMRDQRREILHSCCGCRKPKIPGNAL-ECHEYIEDENV 323
ER + + + P +R R+ + S G + N L +C+EY++ EN+
Sbjct: 173 ERERDMINIYAQMFTQPFSLRQARKVLFASKLGLAQSDFSENMLKQCNEYVKQENI 228
>06_01_0393 +
2831676-2831876,2831986-2832101,2832340-2832421,
2832515-2832671,2832755-2832848,2833942-2834008,
2834464-2835009
Length = 420
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 94 LVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEI 225
+ +PA +A S AC + Q + E S TCH RC+I
Sbjct: 266 MTIPAEAASSSSAFACAVAALAEQQQMYGEASSTATCHTSRCDI 309
>04_03_0218 + 12780061-12780150,12780864-12781394
Length = 206
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = -1
Query: 478 PLIPTTPGFGPF-----CCPSHGLPGNSSQG 401
PL+PT+PG P CPSHG G+ G
Sbjct: 119 PLLPTSPGSRPLPKEEETCPSHGDMGHGPLG 149
>12_01_1066 -
10998305-10998473,10998759-10998910,10999051-10999209,
10999334-10999595,10999913-10999975,11000701-11000876
Length = 326
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 323 DILIFDVFVAFQCVSRYFWFSTSTAAMKYFPS 228
++LI +F+ C+S FWF K FPS
Sbjct: 145 NMLIGTLFLCGSCLSYAFWFIVQAKVNKEFPS 176
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = -3
Query: 488 LLNPA-NPDNTR--IWPVLLPLPWFTGE--QFARLPSGLHYSLPIY 366
+ NPA NP R IWP P PWFT ++ SGL P++
Sbjct: 137 MYNPALNPLMARPPIWPAPPPQPWFTQPVVSVPQMASGLAPQQPLF 182
>03_04_0237 - 19201789-19202421
Length = 210
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 386 HYSLPIYFDDATQSRTARGEFDI 318
H LP+ F D+T RT R +FD+
Sbjct: 74 HIELPVTFGDSTNFRTKRIDFDM 96
>03_02_0917 +
12372122-12372422,12372487-12372524,12373103-12373186,
12373796-12374504,12374641-12374729,12374834-12374903,
12374977-12375060,12375097-12375239,12375337-12375418,
12375605-12375687,12375769-12375835,12376287-12376376,
12377631-12377737,12377862-12377969
Length = 684
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 130 YQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
+Q CV K + + +PW W D+ RC +++ KY
Sbjct: 330 HQICVFKAANESGKPWL-WWDYVHDFSIRCPMKEKKY 365
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 422 TGEQFARLPSGLHYSLPIYFDDATQSRTARGEFDILI 312
TGE L LH+S P + Q + RGE D L+
Sbjct: 1865 TGEGIEMLGGYLHFSAPRRIIELIQEKRLRGELDKLL 1901
>05_05_0136 - 22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 491 CLLNPANPDNTRIWPVLLPLPWFTGEQFARLPSGLHYSLPIY 366
C PA+PD + LP+FT +LP L S P Y
Sbjct: 917 CATTPAHPDKAGY--ICQTLPFFTSLLLGKLPCKLDRSSPSY 956
>02_05_0427 + 28893726-28893930,28895164-28895210
Length = 83
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +3
Query: 162 RLPAVARVVGS-----LHVPPLQMRDQRREILHSCCGCRKPKIP 278
++P +A V+GS PPLQ +++ ++ S CG + KIP
Sbjct: 33 QIPTIASVIGSESSPPSSQPPLQRGGEKQHVMASSCGGER-KIP 75
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 499 PTGVC*IPLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTI 380
P GV +P P PG P P+ G+PG G P V T+
Sbjct: 95 PLGVPQVPGAPLMPGVRPPILPAPGIPG--YPGAPNVPTM 132
>01_06_0919 -
32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Frame = -2
Query: 405 KVALWFALF---SPHLLRRRNAIAHSTWGIRHSHLRCIRGIPVRFPV--------FLVFD 259
KVA WF + + + R +A + WG+R C+ G P++ V FL +D
Sbjct: 758 KVA-WFRVILDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRYD 816
Query: 258 IHSSYEVF 235
++ Y+ F
Sbjct: 817 PYAEYKKF 824
>10_08_0785 - 20536265-20537032
Length = 255
Score = 27.1 bits (57), Expect = 8.4
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = -1
Query: 460 PGFGPFCCPSHGLPGN-----SSQGCPLVCTILSPFTSTTQRNRAQHVGNSTFSSSMYSW 296
PG P PS G+ + ++ C L+C + + RNR G + S
Sbjct: 25 PGIPPADPPSGGVSSDVVVILAALLCALICVVGLAAVARCARNRRNSGGAGAGAGSASPS 84
Query: 295 HSSAFPGIFG 266
HS A G FG
Sbjct: 85 HSPAHAGHFG 94
>07_03_1693 -
28756331-28756435,28756558-28756664,28757114-28757245,
28757412-28757478,28757553-28757635,28757824-28757905,
28763101-28763177,28763278-28763361,28763443-28763512,
28763625-28763713,28763801-28764487,28765700-28765997
Length = 626
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 133 QACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKY 240
Q C+ K + ++PW W D+ RC +++ KY
Sbjct: 282 QICLFKVGNETHKPW-VWWDYVHDFSIRCPMKEKKY 316
>03_02_0169 -
6099621-6099663,6099794-6099915,6100020-6100115,
6100211-6100327,6100431-6100502,6100627-6100790,
6100878-6100978,6101083-6101179,6101298-6101433,
6101540-6101596,6101723-6101808,6102097-6102303,
6103401-6103522,6103625-6103869
Length = 554
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 25 VTMAGVLRIQHGKQLGALFMLCCLVLPALS 114
VT+A L +HG + A F +CC + A S
Sbjct: 365 VTLASSLAARHGPTIMAAFQICCQLWLATS 394
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,499,649
Number of Sequences: 37544
Number of extensions: 347070
Number of successful extensions: 1092
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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