Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0114
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein. 37 0.045
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein. 32 0.96
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein. 32 0.96
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein. 32 0.96
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p... 32 0.96
AK127627-1|BAC87063.1| 662|Homo sapiens protein ( Homo sapiens ... 30 3.9
BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase... 30 5.1
AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein. 30 5.1
BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis f... 29 9.0
AK001401-1|BAA91669.1| 519|Homo sapiens protein ( Homo sapiens ... 29 9.0
AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis g... 29 9.0
AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis d... 29 9.0
AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein. 29 9.0
AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein. 29 9.0
AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein. 29 9.0
AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein. 29 9.0
>AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein.
Length = 1097
Score = 36.7 bits (81), Expect = 0.045
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +3
Query: 240 LHSCCGCRKPKIPGNALECHEYIEDENVEFPTCCARLRCVVEVNGERIVQTRGQPC---E 410
L C G GN+ + E+ E RLR ++ NG I+ TR PC +
Sbjct: 337 LGECSGHTSLSFAGNSYIKYRLSENSKEEDFKLALRLR-TLQSNGI-IMYTRANPCIILK 394
Query: 411 LFPGKPWEGQQNGPNPGVVGISG 479
+ GK W G PG++GISG
Sbjct: 395 IVDGKLWFQLDCGSGPGILGISG 417
>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
Length = 1028
Score = 32.3 bits (70), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
Length = 1028
Score = 32.3 bits (70), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
Length = 1028
Score = 32.3 bits (70), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
protein.
Length = 1097
Score = 32.3 bits (70), Expect = 0.96
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 97 VLPALSAEDVSYQACVDKYSRKGYQP 174
VL AL +E + Y V KY RKGY+P
Sbjct: 944 VLQALGSEPIQYAVPVVKYDRKGYKP 969
>AK127627-1|BAC87063.1| 662|Homo sapiens protein ( Homo sapiens
cDNA FLJ45725 fis, clone HCHON2009766. ).
Length = 662
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 109 LSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAVDVENQKYRE 282
LS ED +A K K Q W+ W DH + +R G Y++ D E ++ E
Sbjct: 581 LSEEDDEREADKQKAKGKKKQWWRPWVDHASM------VRSGDYYLFETDSEEEEEEE 632
>BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase
protein.
Length = 1042
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -1
Query: 457 GFGPFCCPSHGLPGNSSQGCPLVCTILS--PFTSTTQRNRAQHVGNSTFSSSMYSWHSSA 284
G C P++ L N SQ P+ + P+ ST+ N + G+ T + SW SS
Sbjct: 438 GGSSLCDPNNSL-NNCSQCEPITLELCMNLPYNSTSYPN---YFGHRTQKEASISWESSL 493
Query: 283 FPGI 272
FP +
Sbjct: 494 FPAL 497
>AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein.
Length = 1042
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -1
Query: 457 GFGPFCCPSHGLPGNSSQGCPLVCTILS--PFTSTTQRNRAQHVGNSTFSSSMYSWHSSA 284
G C P++ L N SQ P+ + P+ ST+ N + G+ T + SW SS
Sbjct: 438 GGSSLCDPNNSL-NNCSQCEPITLELCMNLPYNSTSYPN---YFGHRTQKEASISWESSL 493
Query: 283 FPGI 272
FP +
Sbjct: 494 FPAL 497
>BC035575-1|AAH35575.1| 1283|Homo sapiens peroxisome biogenesis
factor 1 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTIL 377
PL+ + G F C H P N Q C ++C ++
Sbjct: 720 PLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI 753
>AK001401-1|BAA91669.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ10539 fis, clone NT2RP2001218. ).
Length = 519
Score = 29.1 bits (62), Expect = 9.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 454 FGPFCCPSHGLPGNSSQGCPLVCTILSPFTSTTQRNRAQHVGNS 323
F PF CP PG +G ++ +L+P S T + + +G S
Sbjct: 14 FLPFACPK--TPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGAS 55
>AF030356-1|AAB99758.1| 1283|Homo sapiens peroxisome biogenesis gene
1 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTIL 377
PL+ + G F C H P N Q C ++C ++
Sbjct: 720 PLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI 753
>AF026086-1|AAB87880.1| 1283|Homo sapiens peroxisome biogenesis
disorder protein 1 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTIL 377
PL+ + G F C H P N Q C ++C ++
Sbjct: 720 PLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI 753
>AB052092-1|BAB59063.1| 1283|Homo sapiens Pex1pG843D protein.
Length = 1283
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTIL 377
PL+ + G F C H P N Q C ++C ++
Sbjct: 720 PLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI 753
>AB052091-1|BAB59062.1| 1283|Homo sapiens Pex1pL664P protein.
Length = 1283
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTIL 377
PL+ + G F C H P N Q C ++C ++
Sbjct: 720 PLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI 753
>AB052090-1|BAB59061.1| 1226|Homo sapiens Pex1p-634del690 protein.
Length = 1226
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTIL 377
PL+ + G F C H P N Q C ++C ++
Sbjct: 663 PLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI 696
>AB008112-1|BAA85162.1| 1283|Homo sapiens PEX1 protein.
Length = 1283
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 478 PLIPTTPGFGPFCCPSHGLPGNSSQGCPLVCTIL 377
PL+ + G F C H P N Q C ++C ++
Sbjct: 720 PLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVI 753
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,476,196
Number of Sequences: 237096
Number of extensions: 2022218
Number of successful extensions: 8679
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8672
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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