Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0114
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 31 0.35
Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z79603-8|CAH04750.1| 137|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z75540-4|CAA99849.1| 169|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical pr... 27 7.6
U58735-3|AAC48143.1| 337|Caenorhabditis elegans Hypothetical pr... 27 7.6
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 27 7.6
AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical... 27 7.6
AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative pota... 27 7.6
AL110490-8|CAB54444.2| 602|Caenorhabditis elegans Hypothetical ... 27 10.0
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 27 10.0
AF025379-1|AAC14017.1| 602|Caenorhabditis elegans acetylcholine... 27 10.0
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 31.5 bits (68), Expect = 0.35
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +3
Query: 246 SCCGCRKPKIPGNALECHEYIEDENVEFPTCCARLRCVVEVNGERIVQTRGQPC 407
SCCG RK I G EC +D + T CA + C G T G C
Sbjct: 868 SCCGARKKVIVGRTFECSS-ADDSDAAPSTLCA-VDCCPAAGGYWSEWTTGGSC 919
>Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical
protein F42A8.1 protein.
Length = 370
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 121 DVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGK 237
+ Y ACV R YQ + W+D + YRC DG+
Sbjct: 103 EFGYSACVGTDGRT-YQKGETWTDAKNTYYYRCR-DDGR 139
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Frame = -1
Query: 439 CPSHGLPGNSSQ-----GCPLVCTILSP--FTSTTQRNRAQHVGNSTFSSSM 305
C S G+PGN Q C CTI+ P +TTQ G S M
Sbjct: 231 CASSGVPGNECQSNCAPACEDTCTIVKPVAVATTTQIQSTSSSGGQCVSVCM 282
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 481 IPLIPTTPGFGPFCCPSHGLP-GNSSQGCPLVCTILSPFTSTTQRNRAQ-HVGNSTFSSS 308
+P PT PGFGP + G+P ++ P T+ P T + ++ HV + + +
Sbjct: 204 VPFEPTPPGFGPPDGWAPGMPKPGRTRKLPRYSTVRPPPTPKRKTTQSPIHVVPTEKNIT 263
Query: 307 MYSWHS 290
M W++
Sbjct: 264 MDDWNA 269
>Z81455-3|CAB03808.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 317 LIFDVFVAFQCVSRYFWFSTSTAAMKY 237
L+ DV ++C+S YFW + KY
Sbjct: 849 LVGDVMELYECISTYFWNYIILKSRKY 875
>Z79603-8|CAH04750.1| 137|Caenorhabditis elegans Hypothetical
protein M163.8 protein.
Length = 137
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = -1
Query: 445 FCCPSHGLPGNSSQGCPLVCTILSPFTSTTQRNRAQHVGN-STFSSSMYSWHSSAF 281
FC S ++ CP C + S +STT + + +S+ SW S+ F
Sbjct: 36 FCTSSFYSDAQKTEYCPASCRLCSGASSTTSSSASSSSSTCGDSNSNCASWASNGF 91
>Z75540-4|CAA99849.1| 169|Caenorhabditis elegans Hypothetical
protein F37D6.3 protein.
Length = 169
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 372 GERIVQTRGQPCELFPGKPWEGQQNGPNPGVVGIS 476
G+RI Q C +P P EG + P P + IS
Sbjct: 121 GDRIYAGVSQNCMGYPQNPQEGPRGPPQPWNIDIS 155
>Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical
protein C40C9.1 protein.
Length = 364
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 210 LQMRDQRREILHS-CCGCRKPKIP 278
L+ R RR I + CCGC KP+ P
Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPP 342
>U58735-3|AAC48143.1| 337|Caenorhabditis elegans Hypothetical
protein F20B4.2 protein.
Length = 337
Score = 27.1 bits (57), Expect = 7.6
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +3
Query: 405 CELFPGKPWEGQQNGPNPGVVGI 473
C +FPGK W+ N P + +
Sbjct: 97 CSMFPGKSWKDSNNLKRPSIAKV 119
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 481 IPLIPTTPGFGPFCCPSHGLP-GNSSQGCPLVCTILSPFTSTTQRNRAQ-HVGNSTFSSS 308
+P PT PGFGP + G+P ++ P T+ P T + ++ HV + + +
Sbjct: 204 VPFEPTPPGFGPPDGWAPGMPKPGRTRKLPRYSTVRPPPTPKRKTTQSPIHVVPTEKNIT 263
Query: 307 MYSWHS 290
M W++
Sbjct: 264 MDDWNA 269
>AL032623-19|CAA21519.2| 890|Caenorhabditis elegans Hypothetical
protein B0399.2 protein.
Length = 890
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 317 LIFDVFVAFQCVSRYFWFSTSTAAMKY 237
L+ DV ++C+S YFW + KY
Sbjct: 849 LVGDVMELYECISTYFWNYIILKSRKY 875
>AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative
potassium channel subunitn2P20 protein.
Length = 364
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +3
Query: 210 LQMRDQRREILHS-CCGCRKPKIP 278
L+ R RR I + CCGC KP+ P
Sbjct: 319 LRRRSTRRSIQDTVCCGCFKPRPP 342
>AL110490-8|CAB54444.2| 602|Caenorhabditis elegans Hypothetical
protein Y48B6A.7 protein.
Length = 602
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 383 YSLPIYFDDATQSRTARGEFDILIFDVF 300
Y LP +FD A R EFD LI F
Sbjct: 354 YQLPQFFDKADPPELNRTEFDFLIDRTF 381
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 88 CCLVLPALSAEDVSYQACVDKYSRKGYQPWQEWSDHYTCHR 210
CC++ P ++ DV RKGY+ + + TC R
Sbjct: 295 CCILTPQINCTDVLTGCLTHLCDRKGYRQFMTNNCAKTCAR 335
>AF025379-1|AAC14017.1| 602|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 602
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 383 YSLPIYFDDATQSRTARGEFDILIFDVF 300
Y LP +FD A R EFD LI F
Sbjct: 354 YQLPQFFDKADPPELNRTEFDFLIDRTF 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,729,091
Number of Sequences: 27780
Number of extensions: 289627
Number of successful extensions: 912
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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