Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0113
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 118 9e-26
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 113 2e-24
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 113 3e-24
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 105 9e-22
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 105 9e-22
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 100 2e-20
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 99 6e-20
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 98 1e-19
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 95 7e-19
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 93 3e-18
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 93 4e-18
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 92 7e-18
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 88 1e-16
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 86 4e-16
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 79 7e-14
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 70 4e-11
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 69 5e-11
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 55 9e-07
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 46 8e-04
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 44 0.002
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 42 0.007
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 41 0.022
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 39 0.088
UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole gen... 38 0.15
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.62
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 36 0.62
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 34 1.9
UniRef50_UPI0000383042 Cluster: hypothetical protein Magn0300385... 33 3.3
UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory c... 33 3.3
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 33 3.3
UniRef50_A7IIT3 Cluster: Fumarate lyase; n=2; Rhizobiales|Rep: F... 33 4.4
UniRef50_A7DEN6 Cluster: Tryptophan halogenase; n=1; Methylobact... 33 5.8
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 32 7.6
UniRef50_A5NZ94 Cluster: Crotonyl-CoA reductase precursor; n=1; ... 32 7.6
UniRef50_Q9ZQN7 Cluster: Putative uncharacterized protein At2g35... 32 7.6
UniRef50_Q6H5Y6 Cluster: Putative uncharacterized protein P0620H... 32 7.6
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 32 7.6
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 32 7.6
UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=... 32 7.6
UniRef50_Q4VXS5 Cluster: Transmembrane protein 52; n=1; Homo sap... 32 7.6
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 118 bits (284), Expect = 9e-26
Identities = 51/54 (94%), Positives = 51/54 (94%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSAESWGTGRAVARIPRVRG GTHRSG GAFGNMCRGGRMFAPTK WRRWHRRV
Sbjct: 62 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRV 115
Score = 82.2 bits (194), Expect = 7e-15
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQ 256
HQ
Sbjct: 60 HQ 61
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 113 bits (273), Expect = 2e-24
Identities = 50/54 (92%), Positives = 51/54 (94%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSAESWGTGRAVARIPRVRG GTHRSG GAFGNMCRGGRMFAPTK +RRWHRRV
Sbjct: 179 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWHRRV 232
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 98 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQ
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQ 178
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 113 bits (271), Expect = 3e-24
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSAESWGTGRAVARIPRVRG GTHRSG GAFGNMCRGGRMFAPTK +RRWHR+V
Sbjct: 65 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKV 118
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2
Query: 65 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 244
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 245 AGHQ 256
AGHQ
Sbjct: 61 AGHQ 64
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 105 bits (251), Expect = 9e-22
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSAESWGTGRAVARIPRV G GTHR+G AFGNMCR GRMFAPTK WR+WH+++
Sbjct: 38 TSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKI 91
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 105 bits (251), Expect = 9e-22
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSAESWGTGRAVARIPRV G GTHR+G AFGNMCR GRMFAPTK WR+WH+++
Sbjct: 61 TSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKI 114
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +2
Query: 80 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQ
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQ 60
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 100 bits (240), Expect = 2e-20
Identities = 44/59 (74%), Positives = 47/59 (79%)
Frame = +1
Query: 241 GGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
G TSAESWGTGRAVARIPRV G GTHR+G AFGNMCRGG MF PTK WRRW R++
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKI 115
Score = 52.0 bits (119), Expect = 9e-06
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 251 HQ 256
++
Sbjct: 60 YE 61
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 99.1 bits (236), Expect = 6e-20
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
SA SWGTGRAVARIPR+ G GT SG GAFGNMCRGGRMFAPTK +RRWHR++
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKI 114
Score = 66.1 bits (154), Expect = 5e-10
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +2
Query: 80 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSG 58
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 98.3 bits (234), Expect = 1e-19
Identities = 43/53 (81%), Positives = 43/53 (81%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
SAESWGTGRAVARIPRV G GTHRSG AFGN CR GRM P K WRRWHRRV
Sbjct: 64 SAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRV 116
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 86 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQ 62
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 95.5 bits (227), Expect = 7e-19
Identities = 39/67 (58%), Positives = 51/67 (76%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPW 396
+A + + G+ TSA SWGTGRA+AR+PRV+G GTHR+G A+ N CR G M+APT+ W
Sbjct: 49 QAYAVSKMSGYQ-TSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
Query: 397 RRWHRRV 417
RRWHR+V
Sbjct: 108 RRWHRKV 114
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +2
Query: 83 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+Q
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQ 60
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 93.5 bits (222), Expect = 3e-18
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
SAESWGTGRAVARIPRV GT RSG GAFGNMCRGG MF+P K +RR+HR++
Sbjct: 64 SAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKI 116
Score = 64.1 bits (149), Expect = 2e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 251 HQ 256
HQ
Sbjct: 61 HQ 62
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 93.1 bits (221), Expect = 4e-18
Identities = 38/67 (56%), Positives = 48/67 (71%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPW 396
+A + G+ TSA SWGTGRA++R PRV+G GTHRSG A+ N CR G MFAPT+ W
Sbjct: 49 QAYAISRMSGYQ-TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
Query: 397 RRWHRRV 417
R WHR++
Sbjct: 108 RHWHRKI 114
Score = 59.7 bits (138), Expect = 4e-08
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = +2
Query: 77 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 92.3 bits (219), Expect = 7e-18
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSA SWGTGRAV+R+PRV G GTHRSG GA N CRGGR+F PT WR+WH ++
Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWHHKI 110
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 87.8 bits (208), Expect = 1e-16
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
SAESWGTGRAVAR+PR+ G GT R+G AF N RGG M++P K WRRWHR V
Sbjct: 63 SAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMV 115
Score = 42.7 bits (96), Expect = 0.005
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 89 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQ 61
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 86.2 bits (204), Expect = 4e-16
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
SAESWGTGRA+AR+PRV+G GT R+G GAF N CR GRM PTK RRW R+V
Sbjct: 60 SAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKV 112
Score = 40.3 bits (90), Expect = 0.029
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +2
Query: 92 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQ 58
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 79.0 bits (186), Expect = 7e-14
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRR 414
SA SWGTGRAVARIPR+ G G+ R+G GAFGNM R G MF+P K +R+W R+
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRK 114
Score = 50.0 bits (114), Expect = 4e-05
Identities = 26/59 (44%), Positives = 37/59 (62%)
Frame = +2
Query: 80 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQ 61
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 69.7 bits (163), Expect = 4e-11
Identities = 31/53 (58%), Positives = 36/53 (67%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
SA SWGTGRA A +PRV G G++R+G GA+ N CRGG F P RRW R V
Sbjct: 60 SAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPV 112
Score = 40.3 bits (90), Expect = 0.029
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +2
Query: 77 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAG 56
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 69.3 bits (162), Expect = 5e-11
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWH 408
SA+SWG GR +ARIPR++G GT ++G GA NMCRGGR+F ++W+
Sbjct: 64 SAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWN 113
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 55.2 bits (127), Expect = 9e-07
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +1
Query: 259 SAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
+A SWG GRAVAR+PR G G GA+ N RGG M PT RRW R+V
Sbjct: 59 TAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKV 105
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +2
Query: 86 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQ 57
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 45.6 bits (103), Expect = 8e-04
Identities = 28/73 (38%), Positives = 33/73 (45%)
Frame = +3
Query: 201 LCPRTRGSPTA*ARRLVTNQCRIMGYRTCCCPNSACPWXWYP*VRSXCLR*HVSWWTYVR 380
L P RG P L ++G+R C SA W VR C+R HV WW +VR
Sbjct: 99 LAPGVRGEPPVRHEPLGA----LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVR 154
Query: 381 PHEALAALAPSRQ 419
E L LAP Q
Sbjct: 155 ADEDLPPLAPQDQ 167
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 44.0 bits (99), Expect = 0.002
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGG-RMFAPTKPWRRWHRRV 417
TSAESWG G VA +PRV+G +G A GG + APT P + W +RV
Sbjct: 56 TSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRV 109
Score = 34.7 bits (76), Expect = 1.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 86 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAG 53
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 42.3 bits (95), Expect = 0.007
Identities = 29/93 (31%), Positives = 39/93 (41%)
Frame = +1
Query: 238 QGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
+G S ES+G G +ARIPR +G R G F RGGR P K ++ H +
Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132
Query: 418 KPPTAEXXXXXXXXXXXASQRSFQG*EGHIFEK 516
E + RS+ GH+ EK
Sbjct: 133 N--KKEKKLAIRSAIAATAYRSWVAARGHVVEK 163
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 40.7 bits (91), Expect = 0.022
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 193 SRFYVQELEAALLREQGGWSPTSAESWGTGRAVARIPRVRGXG 321
S + + + + E G+ TSAESWGTGRA +PRVRG G
Sbjct: 32 SNLHKNDSQPYAVSESAGYQ-TSAESWGTGRARGPMPRVRGGG 73
Score = 36.7 bits (81), Expect = 0.35
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 176 DLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
D+VN VH ++ KN QPY VS+ AG+Q
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQ 51
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 38.7 bits (86), Expect = 0.088
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTK 390
TSA S G GR VAR+PR++G S A NM RGGR P +
Sbjct: 69 TSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_A7Q400 Cluster: Chromosome chr13 scaffold_48, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_48, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 131
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1
Query: 386 VGANIRPPRHMLPKAP*P 333
VGANI PPRHMLPKAP P
Sbjct: 107 VGANILPPRHMLPKAPWP 124
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.62
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 128 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 214
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 35.9 bits (79), Expect = 0.62
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
T+AES+G+GR A +PRV+G S AF GGR P + +H ++
Sbjct: 57 TTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKI 105
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 34.3 bits (75), Expect = 1.9
Identities = 29/102 (28%), Positives = 41/102 (40%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHR 411
R+ TSAES+G +AR+PRV+ SG A GGR+ P ++
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAE 109
Query: 412 RVKPPTAEXXXXXXXXXXXASQRSFQG*EGHIFEKDSRSFPL 537
E + +F GH+F KDS FP+
Sbjct: 110 EAN--VKEKRLAVISALSATADIAFVRARGHVF-KDSVRFPI 148
>UniRef50_UPI0000383042 Cluster: hypothetical protein Magn03003854;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03003854 - Magnetospirillum
magnetotacticum MS-1
Length = 547
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 208 QELEAALLREQGGWSPTSAESWGTGRAVARIPRVRGXG 321
+E++A L+R GW A G RA+ R+ +VRG G
Sbjct: 420 EEIDARLIRLAEGWGGAGAPLIGLARALLRLAQVRGRG 457
>UniRef50_UPI00015A6D74 Cluster: Na(+)/H(+) exchange regulatory
cofactor NHE-RF2 (NHERF-2) (Tyrosine kinase activator
protein 1) (TKA-1) (SRY-interacting protein 1) (SIP- 1)
(Solute carrier family 9 isoform A3 regulatory factor 2)
(NHE3 kinase A regulatory protein E3KARP)
(Sodium-hydroge; n=2; Danio rerio|Rep: Na(+)/H(+)
exchange regulatory cofactor NHE-RF2 (NHERF-2) (Tyrosine
kinase activator protein 1) (TKA-1) (SRY-interacting
protein 1) (SIP- 1) (Solute carrier family 9 isoform A3
regulatory factor 2) (NHE3 kinase A regulatory protein
E3KARP) (Sodium-hydroge - Danio rerio
Length = 385
Score = 33.5 bits (73), Expect = 3.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 355 CYRRHXDRTYGYHXHGHAEFGQQHVR 278
CY DR YG+H HG G Q++R
Sbjct: 10 CYLTKGDRGYGFHLHGERNRGAQYIR 35
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 33.5 bits (73), Expect = 3.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 277 TGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TG ARI R++G G R G RGGR P K + H+++
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKI 111
>UniRef50_A7IIT3 Cluster: Fumarate lyase; n=2; Rhizobiales|Rep:
Fumarate lyase - Xanthobacter sp. (strain Py2)
Length = 353
Score = 33.1 bits (72), Expect = 4.4
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 375 VRPHEALAALAPSRQTSDSGXXPLAATVAATGV--PALVSRLR 497
V PHEA AA+A + ++ LAA VA GV P LV RLR
Sbjct: 49 VIPHEAAAAIAQAARSIAVAPADLAAAVARDGVVIPELVRRLR 91
>UniRef50_A7DEN6 Cluster: Tryptophan halogenase; n=1;
Methylobacterium extorquens PA1|Rep: Tryptophan
halogenase - Methylobacterium extorquens PA1
Length = 973
Score = 32.7 bits (71), Expect = 5.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 208 QELEAALLREQGGWSPTSAESWGTGRAVARIPRVRGXG 321
+E+EA L R G W P A + T A+ + + RG G
Sbjct: 851 EEIEARLTRMTGAWGPAGAPARDTAHAILLLAQERGRG 888
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 152 RTGGA-WLHPAPSHSSLNTPTLKVGLPIDSFRYFSEAIPP 36
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
>UniRef50_A5NZ94 Cluster: Crotonyl-CoA reductase precursor; n=1;
Methylobacterium sp. 4-46|Rep: Crotonyl-CoA reductase
precursor - Methylobacterium sp. 4-46
Length = 394
Score = 32.3 bits (70), Expect = 7.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 311 RTRGIRATARPVPHDSALVGDQPPCXXXXXXXXSWT*KREHH*PGPD 171
R R IRA+A P D +G+ PP +W +RE H P D
Sbjct: 96 RPRLIRASASVAPKDLYEIGEIPPLGHVPSRMYAWAIRRERHGPPED 142
>UniRef50_Q9ZQN7 Cluster: Putative uncharacterized protein
At2g35640; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At2g35640 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 340
Score = 32.3 bits (70), Expect = 7.6
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = -1
Query: 467 SSSNGCCQRXXSAVGGLTRRCQRRQGFVGANIRPPRHMLPKAP*PDLWVPXPRTRGIRAT 288
SSS+ G + R CQ+ GFV + P H +P L P P++ +
Sbjct: 149 SSSSAAAAVGNGNGGQILRVCQQSLGFVAPMMAQPMHQIPTTIVLSLPPPPPQSLSLSLP 208
Query: 287 ARPVPHDSALVGDQP 243
+ P P S+ +P
Sbjct: 209 SPPQPPPSSSFHAEP 223
>UniRef50_Q6H5Y6 Cluster: Putative uncharacterized protein
P0620H05.14; n=2; Oryza sativa|Rep: Putative
uncharacterized protein P0620H05.14 - Oryza sativa
subsp. japonica (Rice)
Length = 227
Score = 32.3 bits (70), Expect = 7.6
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAV-ARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWH 408
R+ GGWS +A + G G V +R P + G G G R + P + RR
Sbjct: 88 RQHGGWSTETAAAGGCGNGVHSRRPHLAGVVAIGGVGGQLGAERRSRWQWRPVRRKRRGR 147
Query: 409 RRVKP 423
RR P
Sbjct: 148 RRGGP 152
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 32.3 bits (70), Expect = 7.6
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 292 ARIPRVRGXGTHRSGXGAFGNMCRGG 369
AR PR G G HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 32.3 bits (70), Expect = 7.6
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGR 372
RE GG A+SW TGRA A + R R G R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q5VSH5 Cluster: Chromosome 1 open reading frame 122; n=2;
Eutheria|Rep: Chromosome 1 open reading frame 122 - Homo
sapiens (Human)
Length = 159
Score = 32.3 bits (70), Expect = 7.6
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGN--MCRGGRMFAPTKPWRRW 405
RE+G W SA A++R R+ R G G+ G R GR AP+ W RW
Sbjct: 18 REEGAWPRASAGPDRLSLALSRAGRLPAWTAGRRGWGSAGGHPHSRPGRS-APSSCWTRW 76
>UniRef50_Q4VXS5 Cluster: Transmembrane protein 52; n=1; Homo
sapiens|Rep: Transmembrane protein 52 - Homo sapiens
(Human)
Length = 124
Score = 32.3 bits (70), Expect = 7.6
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = -1
Query: 479 RWDASSSNGCCQRXXSAVGGLTRRCQRRQGFVGANIRPPRHMLPKAP*PDLWVPXP-RTR 303
RW + CC+ S + RC+R G ++RPPR P P P P R R
Sbjct: 3 RWPPADCGCCCRSCRSC---RSCRCRRWVGRRSLSVRPPRGGSLLGPRPSRAHPCPHRWR 59
Query: 302 GIRATARPVPHDSA 261
TA P SA
Sbjct: 60 WASRTAAATPRTSA 73
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,482,211
Number of Sequences: 1657284
Number of extensions: 11634229
Number of successful extensions: 34312
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 32747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34248
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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