Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0113
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   5.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   5.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.1  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.1  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   9.4  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    21   9.4  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   9.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.4  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 245 AGHQPVPNHGVPDVLLP 295
           A + P PN GVP   +P
Sbjct: 174 ARYHPYPNFGVPPAGIP 190


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 145 PVRIQGAHTSGPGQ*CSRFYVQELEAAL 228
           PVRI G H  G    C++      E AL
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIAL 223


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 131 HPAPSHSSLNTPTL 90
           HPA +HS+L +P +
Sbjct: 121 HPAAAHSALLSPAM 134


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 467 WRPSARFKAKKDT 505
           W  + R KAKKDT
Sbjct: 230 WFQNRRMKAKKDT 242


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 255 NQCRIMGYRTCCCPN 299
           +Q R  G  TC CPN
Sbjct: 281 SQRRYTGRATCDCPN 295


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 467 WRPSARFKAKKDT 505
           W  + R KAKKDT
Sbjct: 230 WFQNRRMKAKKDT 242


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 467 WRPSARFKAKKDT 505
           W  + R KAKKDT
Sbjct: 230 WFQNRRMKAKKDT 242


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 118 DGAGCSQAPPVRIQGAHTSGP 180
           + +  S  PP+ I GA  +GP
Sbjct: 300 EDSSISGVPPLSIDGALEAGP 320


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 484 TSAGTPVAATVAAKGXSPLSEV*RDGA 404
           TSA TP+  + A +   PL++   D A
Sbjct: 280 TSAATPLVRSYAPERYPPLAQGVNDDA 306


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 497 KDTFLKKIPEAFPLV 541
           KD + K  P+A PL+
Sbjct: 20  KDFYYKTFPDAVPLI 34


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 497 KDTFLKKIPEAFPLV 541
           KD + K  P+A PL+
Sbjct: 35  KDFYYKTFPDAVPLI 49


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 497 KDTFLKKIPEAFPLV 541
           KD + K  P+A PL+
Sbjct: 253 KDFYYKTFPDAVPLI 267


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 497 KDTFLKKIPEAFPLV 541
           KD + K  P+A PL+
Sbjct: 253 KDFYYKTFPDAVPLI 267


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 497 KDTFLKKIPEAFPLV 541
           KD + K  P+A PL+
Sbjct: 253 KDFYYKTFPDAVPLI 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,731
Number of Sequences: 336
Number of extensions: 2509
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)