Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0113
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 112 2e-25
07_01_0578 + 4295386-4296489,4297394-4297507 111 3e-25
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 33 0.15
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 32 0.26
10_02_0199 + 6668902-6669293,6669825-6669882 32 0.26
02_02_0147 - 7176478-7176832,7177006-7177334 32 0.26
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 30 1.1
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 30 1.4
03_01_0123 + 965657-966214,967827-967995,968632-969236,969333-96... 30 1.4
08_02_0105 + 12448808-12449152,12449218-12449409,12449520-124496... 29 1.8
03_01_0092 - 731069-731434,731569-733080 29 2.4
08_02_1017 - 23616244-23616381,23616471-23616537,23617160-236172... 28 4.3
12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753 28 5.6
12_02_0911 + 24236374-24237582 28 5.6
05_05_0015 + 21530547-21531047 28 5.6
03_01_0147 - 1170481-1171260,1171332-1171511 28 5.6
02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,121... 28 5.6
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 27 7.5
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 7.5
09_06_0153 - 21243108-21245660 27 9.9
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 27 9.9
05_06_0065 - 25303143-25303769,25303868-25304758,25305096-253052... 27 9.9
05_04_0068 + 17635693-17637204 27 9.9
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 112 bits (269), Expect = 2e-25
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSAESWGTGRAV+RIPRV G GTHR+G GAFGNMCRGGRMFAPTK WRRWHRRV
Sbjct: 65 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRV 118
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 74 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 251 HQ 256
HQ
Sbjct: 63 HQ 64
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 111 bits (268), Expect = 3e-25
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +1
Query: 256 TSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWHRRV 417
TSAESWGTGRAV+RIPRV G GTHR+G GAFGNMCRGGRMFAPTK WR+WHRRV
Sbjct: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRV 119
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Frame = +2
Query: 83 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 256
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 33.1 bits (72), Expect = 0.15
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +1
Query: 46 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 201
ASL N + P+F V G SQA V + GAHT G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 32.3 bits (70), Expect = 0.26
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +1
Query: 46 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 201
ASL N I +PTF +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 32.3 bits (70), Expect = 0.26
Identities = 20/47 (42%), Positives = 22/47 (46%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGR 372
RE GG A+SW TGRA A + R R G R A N G R
Sbjct: 30 REGGG----GAQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>02_02_0147 - 7176478-7176832,7177006-7177334
Length = 227
Score = 32.3 bits (70), Expect = 0.26
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAV-ARIPRVRGXGTHRSGXGAFGNMCRGGRMFAPTKPWRRWH 408
R+ GGWS +A + G G V +R P + G G G R + P + RR
Sbjct: 88 RQHGGWSTETAAAGGCGNGVHSRRPHLAGVVAIGGVGGQLGAERRSRWQWRPVRRKRRGR 147
Query: 409 RRVKP 423
RR P
Sbjct: 148 RRGGP 152
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -1
Query: 368 PPRHMLPKAP*PDLWVPXP 312
PPRH++P+ P P WVP P
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 46 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 201
ASL N I +PT +G + G S + + GAHT G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>03_01_0123 +
965657-966214,967827-967995,968632-969236,969333-969434
Length = 477
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 217 EAALLREQGGWSPTSAESWGTGRAV 291
EAALLR G W+ + + WG G V
Sbjct: 367 EAALLRAAGDWARGAGQRWGVGDVV 391
>08_02_0105 +
12448808-12449152,12449218-12449409,12449520-12449685,
12449771-12450201
Length = 377
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 46 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 201
ASL+ N ++ +PT V ++ G S V + GAHT G + C+ F
Sbjct: 197 ASLQGANTNLPAPTSGVATLVQKFRNVGLSAKDMVALSGAHTIGKAR-CTTF 247
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = -1
Query: 365 PRHMLPKAP*PDLWVPXPRTRGIRATARPVP-----HDSALVG 252
P H++P P P L P P+++ R P HD+A G
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAPPPQEQHDTAASG 309
>08_02_1017 -
23616244-23616381,23616471-23616537,23617160-23617238,
23617330-23617486,23617581-23617719,23617820-23617872,
23618037-23618120,23618291-23618359,23618488-23618553,
23618657-23618800,23619331-23619414,23619498-23619596,
23620097-23620219,23620745-23621290
Length = 615
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 170 RPDLVNDVHVSMSKNSRQP--YCVSKEAGHQPVPNHGVPD 283
RP + DV S S +S P SK++GH V HG D
Sbjct: 38 RPSSITDVSRSCSSSSSSPPRSLSSKQSGHADVLAHGAVD 77
>12_02_1212 - 27043723-27044241,27044483-27044850,27045513-27045753
Length = 375
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 490 LETSAGTPVAATVAAKGXSPLSEV*RDGASAARASW 383
L+ AGT +++ A G S + RDG S++ +SW
Sbjct: 320 LDFHAGTASSSSSTAAGWSEVMSFSRDGGSSSGSSW 355
>12_02_0911 + 24236374-24237582
Length = 402
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -1
Query: 422 GLTRRCQRRQGFVGANIRPPRHMLPKAP*PDLWVPXPRTRGIRATA 285
GL C+++Q F A PP+ P P P G+ TA
Sbjct: 333 GLREACRKKQKFAAAAAAPPQQQEPSPPPQQPETPASSGGGMSETA 378
>05_05_0015 + 21530547-21531047
Length = 166
Score = 27.9 bits (59), Expect = 5.6
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +1
Query: 193 SRFYVQELEAALLREQGGWSPTSAESWGTGRAVARIPR--VRGXGTHRSGXGAFGNMCRG 366
+RF L+ AL TS W GR R+PR V G G + RG
Sbjct: 76 TRFEYGILKMALRMAVAAAPKTSHRRWRQGRWRRRLPRHPVADGIEDSDGGGGSRALLRG 135
Query: 367 GRMFAPTKPWRRWHRRVKPPTAE 435
R + WR+ R + PP A+
Sbjct: 136 WRR---GRLWRQRWRVLSPPVAD 155
>03_01_0147 - 1170481-1171260,1171332-1171511
Length = 319
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 40 GIASLK*R-NESIGSPTFSVGVFREE*DGAGCSQAPPVRIQGAHTSGPGQ*CSRF 201
G ASL+ ++I +PTF++ + G +Q V + GAHT G C+ F
Sbjct: 139 GTASLEPEVADNIPAPTFTLDQLTQSFAAKGLTQEEMVTLSGAHTVGRAH-CTSF 192
>02_01_0177 + 1214226-1214294,1214707-1214794,1216095-1216308,
1216413-1216738,1216860-1217013,1217377-1217438,
1218078-1218133,1219456-1221279,1221775-1222698,
1222855-1222866
Length = 1242
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +1
Query: 232 REQGGWSPTSAESWGTGRAVARIPRVRGXGTHRSGXGAFGNMCRGGR 372
R+ GG S S G+GR R RG R G G GGR
Sbjct: 1176 RQGGGRSGYSGRGGGSGRGGGGYQRDRGSQGSRGGYGGGSRFQDGGR 1222
>10_07_0130 + 13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +1
Query: 217 EAALLREQGG-WSPTSAE-SWGTGRAVARIPRVRGXGTHRSG 336
EAAL E GG W+ + E G RA A PR G SG
Sbjct: 916 EAALSPESGGRWAGPAVELGGGDARAAAAEPRGHGNNLRHSG 957
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 155 IRTGGAWLHPAPSHSSLN-TPTLKVGLPIDSF 63
+R+ WL P P+H ++N L + +P+D F
Sbjct: 865 LRSYITWLKPTPAHVAMNPAEALAMQIPVDHF 896
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 132 APCTVSLFSEYTDTKGRATDRLISLL*RSYTSEIYTNSGDK 10
APCTV +F++ +G A+ RL + + S + N GD+
Sbjct: 612 APCTVGVFADRPFWRGGASFRLPTKISTSEETTAARNQGDQ 652
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 371 RPPRHMLPKAP*PDLWVPXPRTRGIRATARPVPHDSALVGDQPP 240
RPPR +P +P V PR I + +RP P ++ G +PP
Sbjct: 204 RPPR--IPVSPSRPPVVASPRDSPIASPSRPEPPVASPPGPEPP 245
>05_06_0065 -
25303143-25303769,25303868-25304758,25305096-25305202,
25305518-25305629
Length = 578
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/71 (26%), Positives = 27/71 (38%)
Frame = +2
Query: 68 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 247
S + PL + S KS + ++ LP V P + +HV K S P C S+
Sbjct: 498 SRDMVPPLPPLPSMKSPSESWLSRALPSVSSNPPATSFLG-IHVQHKKQSPPPRCSSRAP 556
Query: 248 GHQPVPNHGVP 280
H P
Sbjct: 557 AKLVADGHARP 567
>05_04_0068 + 17635693-17637204
Length = 503
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 202 YVQELEAALLREQGGWSPTSA 264
Y+QE+ + + GGWSP+S+
Sbjct: 20 YLQEIRSLAVDSAGGWSPSSS 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,914,908
Number of Sequences: 37544
Number of extensions: 362931
Number of successful extensions: 1103
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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