Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0113
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.6  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       21   6.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   6.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   6.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.2  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 334 GXGAFGNMCRGGRMFAP 384
           G G FG++CRG     P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 456 VAATGVPALVSRLRR 500
           V  TG+PAL+S ++R
Sbjct: 51  VLTTGLPALISWIKR 65


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +2

Query: 194 HVSMSKNSRQPYCVSKEAGHQPV 262
           H+    ++ +P C+ +  GH P+
Sbjct: 324 HIKSPYHTPEPDCIHELLGHMPL 346


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 328 YGYHXHGHAEFGQ 290
           YG H  GHA+ G+
Sbjct: 210 YGRHLPGHAQMGR 222


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 221 QPYCVSKEAGHQPVPNHGVPDV 286
           QP  V+++      P HG P V
Sbjct: 259 QPVTVNRQLNSDVQPGHGSPPV 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,153
Number of Sequences: 438
Number of extensions: 2831
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)