Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0111
(598 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 73 5e-15
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 73 5e-15
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 73 5e-15
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 73 5e-15
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 27 0.61
AY745233-1|AAU93512.1| 100|Anopheles gambiae SOD3B protein. 25 1.9
AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 5.7
AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding pr... 23 9.9
AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding pr... 23 9.9
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 73.3 bits (172), Expect = 5e-15
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +3
Query: 378 HYTEGAXLVDSVIDVVRKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
HYTEGA LVD+V+DVVRKE E+CDCLQGFQLTHSL GTLL
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLL 47
Score = 59.7 bits (138), Expect = 7e-11
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDRIMNTYSVVPSP
Sbjct: 36 GGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSP 69
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 73.3 bits (172), Expect = 5e-15
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +3
Query: 378 HYTEGAXLVDSVIDVVRKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
HYTEGA LVD+V+DVVRKE E+CDCLQGFQLTHSL GTLL
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLL 47
Score = 59.7 bits (138), Expect = 7e-11
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDRIMNTYSVVPSP
Sbjct: 36 GGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSP 69
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 73.3 bits (172), Expect = 5e-15
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +3
Query: 378 HYTEGAXLVDSVIDVVRKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
HYTEGA LVD+V+DVVRKE E+CDCLQGFQLTHSL GTLL
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLL 47
Score = 59.7 bits (138), Expect = 7e-11
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDRIMNTYSVVPSP
Sbjct: 36 GGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSP 69
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 73.3 bits (172), Expect = 5e-15
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +3
Query: 378 HYTEGAXLVDSVIDVVRKEAESCDCLQGFQLTHSLXRXHRFXYGTLL 518
HYTEGA LVD+V+DVVRKE E+CDCLQGFQLTHSL GTLL
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLL 47
Score = 59.7 bits (138), Expect = 7e-11
Identities = 28/34 (82%), Positives = 28/34 (82%)
Frame = +1
Query: 484 GGXTGSCMAPSXISKIREEYPDRIMNTYSVVPSP 585
GG TGS M ISKIREEYPDRIMNTYSVVPSP
Sbjct: 36 GGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSP 69
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 26.6 bits (56), Expect = 0.61
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 67 MREIVHIQAGQCGNQIGAKFWE 132
MRE + + GQ G QIG W+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
>AY745233-1|AAU93512.1| 100|Anopheles gambiae SOD3B protein.
Length = 100
Score = 25.0 bits (52), Expect = 1.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 457 RDSN*HTRSGGXTGSCMAPSXISKIREEY 543
R + ++++ G +G+C+A + I REEY
Sbjct: 65 RGKHDYSKTTGNSGNCIACAIIGVAREEY 93
>AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450
reductase protein.
Length = 679
Score = 23.4 bits (48), Expect = 5.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 121 KFWEIISDXHGIDPTG 168
KFW + D GI+ TG
Sbjct: 225 KFWPTVCDYFGIESTG 240
>AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding
protein AgamOBP31 protein.
Length = 313
Score = 22.6 bits (46), Expect = 9.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 565 KCSLFCQGTLL*FW 524
KC +FC GT L +W
Sbjct: 66 KCLIFCVGTDLRWW 79
>AF393487-1|AAL60412.1| 304|Anopheles gambiae odorant binding
protein 1 protein.
Length = 304
Score = 22.6 bits (46), Expect = 9.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 565 KCSLFCQGTLL*FW 524
KC +FC GT L +W
Sbjct: 66 KCLIFCVGTDLRWW 79
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,889
Number of Sequences: 2352
Number of extensions: 9730
Number of successful extensions: 41
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -