Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0108
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.35 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   1.1  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   4.4  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = -1

Query: 402 CACDRNDSCMAMRGDHIAPSEREVPCRXTFVRPSCPGLLXRHDXXKPSRSESSTFPCVP- 226
           C C  N +CM M GD +   E    C   +  P C  L        P+    S   C P 
Sbjct: 776 CPCPNNGACMQMAGDTVICLE----CPVGYFGPRCE-LCSDGYYGDPTGVYGSVRMCQPC 830

Query: 225 -ISGNVD 208
             +GNVD
Sbjct: 831 DCNGNVD 837


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 97  PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIP 219
           PPP+   +  + +  L  + T E    V ++C E G I+ P
Sbjct: 756 PPPKPPTVTMMDMQQLDTQPTLEFKELVSQKCAERGIIFAP 796


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 81  NELRKTSATNRWHGLV 128
           N L  T+ATNR+ GLV
Sbjct: 426 NGLHSTTATNRFSGLV 441


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 431,776
Number of Sequences: 2352
Number of extensions: 8046
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)