Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0108
         (498 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.1  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 274 VVTLKKPWTRWTDECXTAGNF 336
           +V++ K W +W D   T  N+
Sbjct: 689 LVSVNKSWNKWNDWQETQNNY 709


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 274 VVTLKKPWTRWTDECXTAGNF 336
           +V++ K W +W D   T  N+
Sbjct: 689 LVSVNKSWNKWNDWQETQNNY 709


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 274 VVTLKKPWTRWTDECXTAGNF 336
           +V++ K W +W D   T  N+
Sbjct: 689 LVSVNKSWNKWNDWQETQNNY 709


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +1

Query: 280 TLKKPWTRWTDECXTAGNFAFRWRDMVAPHRHTGVV 387
           T+ K   R  DE         RWRD +    HTG V
Sbjct: 291 TVLKDINRQVDELNFDIQDLERWRDRIYEAIHTGSV 326


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 177 RFRKVRRSW*YLHSQRS 227
           R+   R+ W YLH  RS
Sbjct: 722 RYYPRRKEWLYLHRARS 738


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,828
Number of Sequences: 438
Number of extensions: 2155
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)