Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0107
(616 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 127 2e-28
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 103 3e-21
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 101 1e-20
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 95 1e-18
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 92 1e-17
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 90 4e-17
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 88 2e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 84 3e-15
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 82 1e-14
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 80 5e-14
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 76 6e-13
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 74 2e-12
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 73 4e-12
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 68 2e-10
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 68 2e-10
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 67 3e-10
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 64 3e-09
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 64 3e-09
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 59 7e-08
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 57 4e-07
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 56 9e-07
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 56 9e-07
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 54 3e-06
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 52 1e-05
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 50 6e-05
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 50 6e-05
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 49 8e-05
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 47 3e-04
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 47 3e-04
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 46 5e-04
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 46 5e-04
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 45 0.001
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 44 0.002
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 44 0.004
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 44 0.004
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 42 0.009
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 42 0.015
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.015
UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to prophenolo... 41 0.020
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 39 0.082
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 39 0.11
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 38 0.14
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.14
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 37 0.33
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.58
UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2; Clos... 35 1.8
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.8
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 35 1.8
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 34 2.3
UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p... 34 3.1
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 3.1
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 33 4.1
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 33 4.1
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 5.4
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 33 7.1
UniRef50_Q12483 Cluster: Vacuolar-sorting protein SNF8; n=5; Sac... 33 7.1
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 33 7.1
UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia fuck... 32 9.4
UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3; ... 32 9.4
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 9.4
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 32 9.4
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 127 bits (306), Expect = 2e-28
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
KGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QK
Sbjct: 80 KGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQK 139
Query: 435 DELIIEG 455
DELI+EG
Sbjct: 140 DELIVEG 146
Score = 121 bits (291), Expect = 2e-26
Identities = 81/189 (42%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 199 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPL---TVSPLRVIQLLRYV-TSW 366
+KKELAAVRTVCSH+ENMIK + P+ T VI++ ++ +
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 367 VRNTSEG*RWHLV*LSLTLQNKRM---N*SLKALFGRCL*LCALIQQSTTARNKGYQKVL 537
+R +V + T Q + ++++ G ALIQQSTT +NK +K L
Sbjct: 121 IRRVEMAPGVTVV--NSTAQKDELIVEGNDIESVSGS----AALIQQSTTVKNKDIRKFL 174
Query: 538 GMGLYVSEK 564
GLYVSEK
Sbjct: 175 D-GLYVSEK 182
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 103 bits (247), Expect = 3e-21
Identities = 48/67 (71%), Positives = 54/67 (80%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
KGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QK
Sbjct: 82 KGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQK 141
Query: 435 DELIIEG 455
DELI+EG
Sbjct: 142 DELILEG 148
Score = 96.7 bits (230), Expect = 4e-19
Identities = 42/82 (51%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKW 192
MK I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
+G++KELA VRT+CSHV+NMIK
Sbjct: 61 WGNRKELATVRTICSHVQNMIK 82
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 484 ALIQQSTTARNKGYQKVLGMGLYVSEK 564
ALIQQ+TT +NK +K L G+YVSEK
Sbjct: 159 ALIQQATTVKNKDIRKFLD-GIYVSEK 184
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 101 bits (243), Expect = 1e-20
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 199 SKKELAAVRTVCSHVENMIK 258
+KE+AA+RTVCSH++NMIK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIK 80
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 395
KGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 80 KGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KD
Sbjct: 82 GVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKD 141
Query: 438 ELIIEG 455
EL+++G
Sbjct: 142 ELVLDG 147
Score = 92.3 bits (219), Expect = 8e-18
Identities = 40/80 (50%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWF 195
MK I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 196 GSKKELAAVRTVCSHVENMI 255
G+++ +AA+RT SHV+N+I
Sbjct: 61 GTRRTMAAIRTAISHVQNLI 80
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 91.9 bits (218), Expect = 1e-17
Identities = 37/77 (48%), Positives = 54/77 (70%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KD
Sbjct: 99 GVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKD 158
Query: 438 ELIIEGTLWKMSLALCS 488
E+++ G ++ C+
Sbjct: 159 EIVLTGNSLELLSQSCA 175
Score = 77.0 bits (181), Expect = 3e-13
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Frame = +1
Query: 64 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 243
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 244 ENMIKE*LKASNTRCVLCMLTSPLTVSPL---RVIQLLRYVTSWVRNTSEG*RWHLV*LS 414
ENMI K + P+ V+ RV+++ + + R L+
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVR-----RIELLDGI 148
Query: 415 LTLQNKRMN*SLKALFGRCL*L----CALIQQSTTARNKGYQKVLGMGLYVSEKN 567
+N++ + L G L L CA IQ + + K +K L G+YVSE+N
Sbjct: 149 TCYRNEKAKDEI-VLTGNSLELLSQSCATIQLRSAIKYKDVRKFLD-GIYVSERN 201
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/66 (62%), Positives = 50/66 (75%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KD
Sbjct: 81 GVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKD 140
Query: 438 ELIIEG 455
E+I+EG
Sbjct: 141 EIILEG 146
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGS 201
+ I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGS 61
Query: 202 KKELAAVRTVCSHVENMI 255
+K A +R+V S + NMI
Sbjct: 62 RKHNACIRSVYSIINNMI 79
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 87.8 bits (208), Expect = 2e-16
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
KGVT GFQYKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QK
Sbjct: 142 KGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQK 201
Query: 435 DELIIEG 455
D++++EG
Sbjct: 202 DQVLVEG 208
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 129
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKW 192
MK I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKW 60
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
+G++KELA V T+CS V+N IK
Sbjct: 61 WGNRKELATVHTICSPVQNTIK 82
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
MK I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 199 SKKELAAVRTVCSHVENMI 255
+K +AA+RTV S V+NMI
Sbjct: 61 GRKHVAALRTVKSLVDNMI 79
Score = 79.8 bits (188), Expect = 5e-14
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ 431
GVTKG++YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S
Sbjct: 81 GVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNV 140
Query: 432 KDELIIEG 455
KDE+++ G
Sbjct: 141 KDEIVLSG 148
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 79.8 bits (188), Expect = 5e-14
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S K
Sbjct: 78 KGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVK 137
Query: 435 DELIIEG 455
DELI+ G
Sbjct: 138 DELILRG 144
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +1
Query: 28 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAND-TISVAVWFPRGK 61
Query: 208 ELAAVRTVCSHVENMIK 258
A RT+CSH+ENM K
Sbjct: 62 RNALPRTICSHIENMFK 78
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 76.2 bits (179), Expect = 6e-13
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 4/83 (4%)
Frame = +1
Query: 19 MKQIVANQKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVE 186
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVE 119
Query: 187 KWFGSKKELAAVRTVCSHVENMI 255
WFG K A +RTVCSH+ENMI
Sbjct: 120 MWFGLTKNKACIRTVCSHIENMI 142
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 365
GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 144 GVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 74.1 bits (174), Expect = 2e-12
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KD
Sbjct: 82 GVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKD 141
Query: 438 ELIIEGT 458
E+ + G+
Sbjct: 142 EISVFGS 148
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWF 195
M I +K+KIP + + K+R ++ G G + R+F+ + IR + + + W
Sbjct: 1 MLTIKTIRKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWM 60
Query: 196 GSKKELAAVRTVCSHVENMI 255
KK+LA + T+ SH+ NMI
Sbjct: 61 AGKKQLAKLNTIASHITNMI 80
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 73.3 bits (172), Expect = 4e-12
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R ++M GV V KD
Sbjct: 91 GVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGKD 148
Query: 438 ELIIEG 455
E+ +EG
Sbjct: 149 EICLEG 154
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 192
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 193 FGSKKELAAVRTVCSHVENMI 255
+G++++ A VRT+ SH++NMI
Sbjct: 69 YGNRRDSAVVRTIASHIKNMI 89
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 67.7 bits (158), Expect = 2e-10
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------ 171
MK I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN +
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKS 60
Query: 172 LLKVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPL---RVIQ 342
+ V W +K+ V +V S + NMI+ + VL P+ ++ + + ++
Sbjct: 61 RVSVRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVE 120
Query: 343 LLRYVTSWVRNTSEG*RWHLV*LSLTLQNKRMN*SLKALFGRCL----*LCALIQQSTTA 510
+ ++ + T + L +++T +N+ ++ L G L CALI Q+
Sbjct: 121 IKNFLGEKIIRTIK----CLPGVTIT-RNEAEEKNVLTLQGNDLNNVSLTCALIHQACAV 175
Query: 511 RNKGYQKVLGMGLYVSEK 564
+NK ++ L G+YVSEK
Sbjct: 176 KNKDIRQFLD-GIYVSEK 192
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 201 QKGACRREDSLFTCREHDKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 380
+K C+ R +GVT G+++KM YAHFPI +EI+NFLGEK I
Sbjct: 71 RKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKII 130
Query: 381 RRVKMAPGVTVV-NSPKQKDELIIEG 455
R +K PGVT+ N ++K+ L ++G
Sbjct: 131 RTIKCLPGVTITRNEAEEKNVLTLQG 156
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
KGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV +
Sbjct: 80 KGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRG 134
Query: 435 DELIIEG 455
E+I+EG
Sbjct: 135 QEIIVEG 141
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 220 VRTVCSHVENMIK 258
RT +H+ NMIK
Sbjct: 68 ARTFAAHIRNMIK 80
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +3
Query: 222 EDSLFTCREHDKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 401
++ L +C EHD+G GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++
Sbjct: 20 QNHLQSCSEHDQG---GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 402 GVTVVNSPKQKDELI 446
V S QK+EL+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
K VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V ++K
Sbjct: 99 KAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERK 157
Query: 435 DELIIEG 455
D ++IEG
Sbjct: 158 DTIVIEG 164
Score = 39.9 bits (89), Expect = 0.047
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +1
Query: 4 KQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLL 177
K P M+ I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +
Sbjct: 17 KDLPLMR-ILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---I 72
Query: 178 KVEKWFGSKKELAAVRTVCSHVENMIK 258
++ W G +K +A TV S + N IK
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIK 99
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 413
KGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV
Sbjct: 80 KGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV 130
Score = 59.7 bits (138), Expect = 5e-08
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 220 VRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
VRT +H+ NMIK + R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 59.3 bits (137), Expect = 7e-08
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKW 192
M+ I NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
+ K LA T+ SHV+NMIK
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIK 75
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD
Sbjct: 81 GVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKD 135
Query: 438 ELIIEG 455
++I+EG
Sbjct: 136 DVIVEG 141
Score = 54.4 bits (125), Expect = 2e-06
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWF 195
M+ + + V IP+G+ VHV + V V+GP G ++++F H + IR V + VE +
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFH 59
Query: 196 GSKKELAAVRTVCSHVENMI 255
+KK+ A V T+ S + NMI
Sbjct: 60 ATKKDYALVGTIASIINNMI 79
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 55.6 bits (128), Expect = 9e-07
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 413
+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV
Sbjct: 76 RGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTV 126
Score = 42.3 bits (95), Expect = 0.009
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +1
Query: 40 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 219
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 220 VRTVCSHVENMIK 258
T+ +H +NMI+
Sbjct: 64 TGTLEAHAKNMIR 76
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 55.6 bits (128), Expect = 9e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 395
GV +GF+Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+
Sbjct: 99 GVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKI 142
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K+
Sbjct: 85 GVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKE 140
Query: 438 ELIIEG 455
+++IEG
Sbjct: 141 DIVIEG 146
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKV 183
M+ + + ++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +
Sbjct: 1 MRVVYSVEEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-M 59
Query: 184 EKWFGSKKELAAVRTVCSHVENM 252
E + K+E A + T ++NM
Sbjct: 60 EVFKARKREYAILGTYKGILKNM 82
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPKQK 434
GVT G++YKM VY+HFPI +E + F+G K + V GV + N K
Sbjct: 89 GVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAK 148
Query: 435 DELIIEG 455
DE+ IEG
Sbjct: 149 DEINIEG 155
Score = 38.7 bits (86), Expect = 0.11
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Frame = +1
Query: 22 KQIVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLK 180
+ ++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 3 RPVLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIV 62
Query: 181 VEKWFGSKKELAAVRTVCSHVENMI 255
WFG++K LA + T+ V+NMI
Sbjct: 63 ARCWFGNRKLLARIGTLFGIVKNMI 87
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 49.6 bits (113), Expect = 6e-05
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
G G++Y ++ + HFPI+ V G+ + ++ N +GEK IRR K+ PGV V + +
Sbjct: 84 GTINGYRYYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VKGE 138
Query: 438 ELIIEGT 458
++++EG+
Sbjct: 139 DIVVEGS 145
Score = 46.0 bits (104), Expect = 7e-04
Identities = 22/80 (27%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWF 195
+K ++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F
Sbjct: 4 LKAAYIREEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTF 62
Query: 196 GSKKELAAVRTVCSHVENMI 255
+++ A + ++ +H++NMI
Sbjct: 63 ADRRKKALLYSIIAHIKNMI 82
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/101 (24%), Positives = 53/101 (52%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG 198
M+ + ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKL-SVNDNKIILETYFA 59
Query: 199 SKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
+++E + T SH++NM++ R +C P+ V
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
Score = 47.2 bits (107), Expect = 3e-04
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Frame = +3
Query: 210 ACRREDSLF-TCREHDKGVTKGFQ----YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 374
A RRE L T R H K + +G Q Y+++ Y HFP+ V EGN +I + NFLGEK
Sbjct: 59 ATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEK 116
Query: 375 --YIRRVKMAPGVTV-VNSPKQKDELIIE 452
I+ + V V + K + E+++E
Sbjct: 117 APIIKELPYLDKVKVKIEQNKDETEIVVE 145
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 49.2 bits (112), Expect = 8e-05
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 413
+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V
Sbjct: 79 EGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV 129
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/64 (35%), Positives = 35/64 (54%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GV+KGF Y ++ VY+HFPI+ + + +EI N G K I + V V + K
Sbjct: 83 GVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKK 142
Query: 438 ELII 449
E+I+
Sbjct: 143 EIIL 146
Score = 42.3 bits (95), Expect = 0.009
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKW 192
MK ++ + +P + + +K + + KG G L + F + V+I + + L V +
Sbjct: 1 MKHVLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCY 60
Query: 193 FGSKKELAAVRTVCSHVENMI 255
+ +K A VRT+ S + NMI
Sbjct: 61 YNNKSSSAIVRTITSIIYNMI 81
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKD 437
GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+ G T V +
Sbjct: 79 GVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETKVK--VSGN 133
Query: 438 ELIIEG 455
E+++ G
Sbjct: 134 EIVVSG 139
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/70 (30%), Positives = 42/70 (60%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 225
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 226 TVCSHVENMI 255
T SH++N+I
Sbjct: 68 TFASHLKNLI 77
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 46.4 bits (105), Expect = 5e-04
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
+G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +
Sbjct: 82 EGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGE 137
Query: 435 DELIIEGTLW 464
D +++ G +W
Sbjct: 138 D-VLLTGEVW 146
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/93 (22%), Positives = 49/93 (52%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 223 RTVCSHVENMIKE*LKASNTRCVLCMLTSPLTV 321
T S + N+ + ++ + + P+TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +3
Query: 258 GVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 386
GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR
Sbjct: 76 GVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRR 116
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/67 (35%), Positives = 42/67 (62%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
+GV G+ K++ VYAHFPI + +G ++I + NF GE+ R+ K+ G VV+ +
Sbjct: 64 EGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSARKAKIVGGTKVVS---KG 118
Query: 435 DELIIEG 455
+++I+ G
Sbjct: 119 EDVIVTG 125
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V+ +
Sbjct: 79 KGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQVS--VKG 133
Query: 435 DELIIEG 455
D L + G
Sbjct: 134 DRLFLNG 140
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 401
+GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 80 RGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALP 125
Score = 37.9 bits (84), Expect = 0.19
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +1
Query: 43 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 222
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 223 RTVCSHVENMIK 258
T +H+ NM +
Sbjct: 69 GTWAAHLTNMAR 80
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQK 434
KGVT+G +YK++ VY+HFP + + I NF+GE P V + P +
Sbjct: 97 KGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN-------VPRVAEIVDP-EN 148
Query: 435 DELIIEG 455
E+I++G
Sbjct: 149 TEVIVQG 155
Score = 33.5 bits (73), Expect = 4.1
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Frame = +1
Query: 28 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 192
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 193 FGSKKELAAVRTVCSHVENMIK 258
++++ A + + +++ENM K
Sbjct: 76 RSNRRQKAILGMIKAYIENMQK 97
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 42.3 bits (95), Expect = 0.009
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 195
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 196 GSKKELAAVR-TVCSHVENMIK 258
+K L A+R T SHV NMIK
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIK 86
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 41.5 bits (93), Expect = 0.015
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 255 KGVTKGFQYKMRAVYAHFPINCV 323
KGV+ GF+YK+R+VYAHFP+N V
Sbjct: 47 KGVSLGFRYKVRSVYAHFPLNVV 69
Score = 37.1 bits (82), Expect = 0.33
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +1
Query: 205 KELAAVRTVCSHVENMIK 258
KELA VRT+CSHV+NMIK
Sbjct: 30 KELATVRTICSHVQNMIK 47
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.015
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Frame = +1
Query: 19 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRL 174
MK+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL 54
>UniRef50_UPI00015B4F87 Cluster: PREDICTED: similar to
prophenoloxidase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to prophenoloxidase - Nasonia
vitripennis
Length = 994
Score = 41.1 bits (92), Expect = 0.020
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = -3
Query: 416 NDSHTRCHLYPSDVFLTQEVTYLNN*ITLSGDTVNGEVSIHSTHLVLEAFSYSFIMFSTC 237
N + CH SD+ L++ + + T G V HL + FSYSF++ +T
Sbjct: 751 NPNTLNCHWTKSDIDLSRGLDF----------TPRGSVLARLQHLNHDEFSYSFVVNNTN 800
Query: 236 EQTVLTAASSFLDPNHFSTFRRRGFT-MRMSTAKCLKFLLRTPRGPLTVTR 87
Q V F+ P + T R F R+ + KF R RG TV R
Sbjct: 801 NQEVTGTVRVFIAPKYDETGRALSFNDQRLLMIEMDKFTTRLRRGQNTVNR 851
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 39.1 bits (87), Expect = 0.082
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 211 LAAVRTVCSHVENMI 255
A T S + NM+
Sbjct: 62 RALHGTTRSLINNMV 76
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 38.7 bits (86), Expect = 0.11
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 207
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 208 ELAAVRTVCSHVENMIK 258
A T + V NM++
Sbjct: 63 TRAMAGTTRALVNNMVQ 79
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 38.3 bits (85), Expect = 0.14
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 9/67 (13%)
Frame = +1
Query: 85 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 237
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 238 HVENMIK 258
++NMI+
Sbjct: 113 QIKNMIR 119
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 135
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 37.1 bits (82), Expect = 0.33
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+A + + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.58
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 138
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_A0UVM0 Cluster: Signal peptidase I precursor; n=2;
Clostridium|Rep: Signal peptidase I precursor -
Clostridium cellulolyticum H10
Length = 189
Score = 34.7 bits (76), Expect = 1.8
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1
Query: 280 YWKPLVTPLSCSLHVNRLSSRRQAPFWIRTISQPSGDE 167
+W ++ PL ++ V+R S Q FW++ + +GDE
Sbjct: 80 FWDNVIDPLKYNILVSRFSDNNQQVFWVKRVIGKAGDE 117
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 123
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 34.7 bits (76), Expect = 1.8
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL 174
VA +KIP G+ V+V + +TVKG G L R H AV + + L
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAEL 51
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 34.3 bits (75), Expect = 2.3
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 138
V N+ +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q95S25 Cluster: GM14169p; n=3; Sophophora|Rep: GM14169p -
Drosophila melanogaster (Fruit fly)
Length = 730
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 178 KVEKWFGSKKELAAVRTVCSHVENMIKE*LKASNTRCVLCMLTSPLTVSPLRVIQLLR 351
++E+ G++ E A+++ H+E +KE +K + C+ L SP+ + R+ QLL+
Sbjct: 316 RLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRS-RIEQLLK 372
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 33.9 bits (74), Expect = 3.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 251 MFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRRDF 78
+F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R F
Sbjct: 24 LFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLRCF 83
Query: 77 T 75
+
Sbjct: 84 S 84
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.5 bits (73), Expect = 4.1
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ IP G+TV +K +VTVKGP+G L +
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 33.5 bits (73), Expect = 4.1
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 207
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 208 ELAAVRTVCSHVENMIK 258
A T S + NM++
Sbjct: 62 HRALHGTTRSLLGNMVE 78
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 5.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 32.7 bits (71), Expect = 7.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 159
+ N+ + +P G+ + +VTVKGP+G L R F ++IR+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIRV 45
>UniRef50_Q12483 Cluster: Vacuolar-sorting protein SNF8; n=5;
Saccharomycetales|Rep: Vacuolar-sorting protein SNF8 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 233
Score = 32.7 bits (71), Expect = 7.1
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 273 FQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 452
FQ + + P N +T++ I+EI + LG I +K G V S DE++
Sbjct: 150 FQIRGKKFLRSVP-NELTSDQTKILEICSILGYSSISLLKANLGWEAVRSKSALDEMVAN 208
Query: 453 GTLW 464
G LW
Sbjct: 209 GLLW 212
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.7 bits (71), Expect = 7.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR 126
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_A6S819 Cluster: Citrate synthase; n=1; Botryotinia
fuckeliana B05.10|Rep: Citrate synthase - Botryotinia
fuckeliana B05.10
Length = 534
Score = 32.3 bits (70), Expect = 9.4
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 338 ITLSGDTVNGEVSIHSTHLVLEAFSYSFIMFS 243
+ L GD G VS H+THLV A S F+ +S
Sbjct: 297 LALHGDHEGGNVSAHTTHLVGSALSDPFLSYS 328
>UniRef50_Q8TMD2 Cluster: Putative uncharacterized protein; n=3;
Euryarchaeota|Rep: Putative uncharacterized protein -
Methanosarcina acetivorans
Length = 255
Score = 32.3 bits (70), Expect = 9.4
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Frame = +3
Query: 336 NSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE------LIIEGTLWK 467
+SI + NF +K+ R V + PGV V +S + KDE ++I+ +WK
Sbjct: 51 SSIGQAENFSRKKFFRGVVLPPGVPVTSSGRIKDETGFPGDVVIKDGIWK 100
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 9.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 46 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 132
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 32.3 bits (70), Expect = 9.4
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +1
Query: 31 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 210
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 211 LAAVRTVCSHVENMIK 258
A + V N +K
Sbjct: 62 RALHGLTRTLVANAVK 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,643,947
Number of Sequences: 1657284
Number of extensions: 12571220
Number of successful extensions: 29055
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 28307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29030
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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