Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0100
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0393 - 22581651-22582046,22582191-22582196                       30   1.8  
08_01_0511 + 4459685-4459755,4461553-4463653,4463741-4463808,446...    27   9.7  

>02_04_0393 - 22581651-22582046,22582191-22582196
          Length = 133

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 322 EVVFFKHFSGFWHEGGVG*HRMGY 251
           E+V++ H  G++H GGV  H  GY
Sbjct: 90  ELVYYHHGYGYYHPGGVYHHHPGY 113


>08_01_0511 +
           4459685-4459755,4461553-4463653,4463741-4463808,
           4465156-4465282,4465379-4465429
          Length = 805

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 499 VSLSFFRIFASLDFFFKNFSTAATLLGFDALFDFPQLEHL 380
           + +S +  F  L +FF + +   TLL F+     P+L+HL
Sbjct: 560 IFISSYNAFRCLKYFFLHINMCGTLLEFEE-GSMPKLQHL 598


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,519,810
Number of Sequences: 37544
Number of extensions: 300848
Number of successful extensions: 864
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)