Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0092
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   3.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   3.2  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   4.3  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   9.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   9.8  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.8  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.8  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 421 IRLTNKYWTVTWIPENQYL 477
           IRL  +YWT+  IP+ + L
Sbjct: 624 IRLETQYWTLVEIPKQEKL 642


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 421 IRLTNKYWTVTWIPENQYL 477
           IRL  +YWT+  IP+ + L
Sbjct: 624 IRLETQYWTLVEIPKQEKL 642


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 281 KSF*VVGPAMQAGALSWLPKMLHREEP 201
           KSF ++G  +++  L W+ + LH   P
Sbjct: 360 KSFLLLGGTVRSKMLDWIGRCLHANVP 386


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = -1

Query: 263 GPAMQAGALSWLPKMLHREEPGRPAADST*HRYGGPRKCSS 141
           G    A   S +P  +HR  PG P   +     G    C S
Sbjct: 142 GSMASAPGTSSVPLTIHRRSPGVPHHVAEPQHLGATHSCVS 182


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = -1

Query: 263 GPAMQAGALSWLPKMLHREEPGRPAADST*HRYGGPRKCSS 141
           G    A   S +P  +HR  PG P   +     G    C S
Sbjct: 142 GSMASAPGTSSVPLTIHRRSPGVPHHVAEPQHLGATHSCVS 182


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 260 PAMQAGALSWLPKMLHREEPGRPAADST 177
           P +++  L WLP +L    PGR     T
Sbjct: 330 PWIKSVFLQWLPWILRMGRPGRKITRKT 357


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 260 PAMQAGALSWLPKMLHREEPGRPAADST 177
           P +++  L WLP +L    PGR     T
Sbjct: 330 PWIKSVFLQWLPWILRMGRPGRKITRKT 357


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,365
Number of Sequences: 2352
Number of extensions: 13697
Number of successful extensions: 71
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)