Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0091
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118519-1|AAM49888.1|  104|Drosophila melanogaster LD16736p pro...    33   0.34 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   3.1  

>AY118519-1|AAM49888.1|  104|Drosophila melanogaster LD16736p
           protein.
          Length = 104

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 21/54 (38%), Positives = 24/54 (44%)
 Frame = -2

Query: 247 SNKSCKLHLHQVKXHKRDNKHTFQRVWRDAQCS*GKQVVAVCMDFFHSSLYHIP 86
           S KSC LH       K D+ HT    +R A C  G+Q V    D  HS    IP
Sbjct: 19  SGKSCLLHHFIESKFKDDSSHTIGVEFRLADCERGRQ-VGKATDMGHSRSGEIP 71


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
           protein.
          Length = 23015

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/69 (28%), Positives = 24/69 (34%)
 Frame = +1

Query: 64  CVTAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVXLLGEGATCKIY 243
           C  + G   C    C       P   C    E R   A KC     CV + G G TC+  
Sbjct: 684 CTNSAGGFTCA---CPPGFSGDPHSKCVDVDECRTG-ASKCGAGAECVNVPGGGYTCRCP 739

Query: 244 SKELAKPPP 270
              +A P P
Sbjct: 740 GNTIADPDP 748



 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 100  DYCEKNPCIQPPLVCPKNTEHR-ARHAGKCACCP 198
            D+ +KNPC+  P  C +N+E +   +   C+C P
Sbjct: 9092 DHPKKNPCVPSP--CGRNSECKLLNNRAVCSCIP 9123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,397,594
Number of Sequences: 53049
Number of extensions: 499273
Number of successful extensions: 1202
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)