Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0085
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 30 1.0
AC024785-1|AAF60598.2| 466|Caenorhabditis elegans C-type lectin... 30 1.0
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 30 1.0
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 29 1.8
Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical pr... 27 5.5
U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical pr... 27 5.5
AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical... 27 9.7
AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacet... 27 9.7
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 216 KQVDIDSNGIRLLDKYSFLCEMYDEDADEIKDLTL 320
K V +D +G+RLL FLC DED ++ + L
Sbjct: 419 KMVLLDIDGVRLLYPSKFLCVTIDEDRQMLESIGL 453
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 216 KQVDIDSNGIRLLDKYSFLCEMYDEDADEIKDLTL 320
K V +D +G+RLL FLC DED ++ + L
Sbjct: 419 KMVLLDIDGVRLLYPSKFLCVTIDEDRQMLESIGL 453
>AC024785-1|AAF60598.2| 466|Caenorhabditis elegans C-type lectin
protein 70 protein.
Length = 466
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 282 YDEDADEIKDLTLNYFPFDNSVQIIDAKKGXNVLKRVQLPPLNLDMLPIGNIVNIFSK 455
Y D D + D ++ P D+S+ D K G NVL + N + P G+IV + K
Sbjct: 218 YFTDYDNVTDYVDSHAP-DSSLGFGDTKTGSNVLDVIDKFYDNTKLTPCGSIVMVLLK 274
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 216 KQVDIDSNGIRLLDKYSFLCEMYDEDADEIKDLTL 320
K V +D +G+RLL FLC DED ++ + L
Sbjct: 419 KMVLLDIDGVRLLYPSKFLCVTIDEDRQMLESIGL 453
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 225 DIDSNGIRLLDKYSFLCEMYDEDADEIKDLTL 320
D DSNG LD+ + C M+ ED D ++D+ +
Sbjct: 157 DYDSNGA--LDRTEYGCFMHPEDCDHMRDVVV 186
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 225 DIDSNGIRLLDKYSFLCEMYDEDADEIKDLTL 320
D DSNG LD+ + C M+ ED D ++D+ +
Sbjct: 157 DYDSNGA--LDRTEYGCFMHPEDCDHMRDVVV 186
>Z82073-1|CAB04923.1| 444|Caenorhabditis elegans Hypothetical
protein W06D12.2 protein.
Length = 444
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 359 VYYLNRIVKWKIIEG*IFYFVSILIIHFTQETIFIK*SYTIAIDINLFMLGNKSM 195
V Y W + E F+F+S+ I F T S+T+A+ +F+LG S+
Sbjct: 241 VAYFAYFENWTLFESVYFFFISMTTIGFGDFTP----SHTVAVGGIVFILGGLSV 291
>U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical
protein C24A8.1 protein.
Length = 582
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 279 FHTRNYIYQVVVYHCYRYQPVYV 211
F+TR + V+ +HC Y P+Y+
Sbjct: 128 FNTRTSYFLVIEHHCGIYNPIYM 150
>AL110485-15|CAB60363.2| 671|Caenorhabditis elegans Hypothetical
protein Y46G5A.21 protein.
Length = 671
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 270 LCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGXNVLKRVQLP 401
L +++D D ++ + F DN ++I+D +K VL ++ LP
Sbjct: 528 LPQLFDATLDILRASEILQFTDDNKIEILD-EKNAEVLSKLVLP 570
>AJ414404-1|CAC92449.1| 671|Caenorhabditis elegans dihydroxyacetone
phosphate acyltransferaseprotein.
Length = 671
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 270 LCEMYDEDADEIKDLTLNYFPFDNSVQIIDAKKGXNVLKRVQLP 401
L +++D D ++ + F DN ++I+D +K VL ++ LP
Sbjct: 528 LPQLFDATLDILRASEILQFTDDNKIEILD-EKNAEVLSKLVLP 570
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,660,417
Number of Sequences: 27780
Number of extensions: 170636
Number of successful extensions: 442
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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