Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0079
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 124 2e-29
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 122 9e-29
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 122 2e-28
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 122 2e-28
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 118 2e-27
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 118 2e-27
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 81 4e-16
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 81 4e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 72 2e-13
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 71 4e-13
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 69 1e-12
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 69 1e-12
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 69 1e-12
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 69 1e-12
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 69 2e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 67 6e-12
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 67 6e-12
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 67 6e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 67 6e-12
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 66 8e-12
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 66 8e-12
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 61 3e-10
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 61 3e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 45 2e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 45 2e-05
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 27 4.8
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 6.3
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 124 bits (300), Expect = 2e-29
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+VYYNEA+GGKYVPRAV+VDL PGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNN AKGHYT
Sbjct: 48 NVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 434 D 436
+
Sbjct: 108 E 108
Score = 91.9 bits (218), Expect = 2e-19
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVH+QAGQCGNQIGAKFWEVISDEHGI G Y G+SDLQLERI
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERI 47
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 122 bits (295), Expect = 9e-29
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+VYYNEASGGKYVPRA +VDL PGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNN AKGHYT
Sbjct: 48 NVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYT 107
Query: 434 D 436
+
Sbjct: 108 E 108
Score = 100 bits (240), Expect = 4e-22
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVHIQAGQCGNQIGAKFWEVISDEHGID TGAY+GDSDLQLERI
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERI 47
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 122 bits (293), Expect = 2e-28
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +2
Query: 257 VYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYTD 436
VYYNEA+ GKYVPRAV+VDL PGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNN AKGHYT+
Sbjct: 49 VYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 89.0 bits (211), Expect = 1e-18
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G+SDLQLERI
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERI 47
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 122 bits (293), Expect = 2e-28
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = +2
Query: 257 VYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYTD 436
VYYNEA+ GKYVPRAV+VDL PGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNN AKGHYT+
Sbjct: 49 VYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTE 108
Score = 87.8 bits (208), Expect = 3e-18
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVH+QAGQCGNQIG+KFWEVISDEHGI G + G++DLQLERI
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERI 47
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 118 bits (284), Expect = 2e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+VYYNEA KYVPRAV+VDL PGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNN AKGHYT
Sbjct: 48 NVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYT 107
Query: 434 D 436
+
Sbjct: 108 E 108
Score = 94.7 bits (225), Expect = 3e-20
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERI
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERI 47
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 118 bits (284), Expect = 2e-27
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+VYYNEA KYVPRAV+VDL PGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNN AKGHYT
Sbjct: 48 NVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYT 107
Query: 434 D 436
+
Sbjct: 108 E 108
Score = 94.7 bits (225), Expect = 3e-20
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERI 254
MREIVHIQAGQCGNQIG+KFWEVISDEHGID +G Y GDSDLQLERI
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERI 47
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 81.0 bits (191), Expect = 4e-16
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERIMSTITKLQG 281
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 74.5 bits (175), Expect = 3e-14
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHY 430
YY E G KYVPRA++VDL P +++ VRS +G++F P+N V G+SGAGNN ++G+Y
Sbjct: 50 YYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYY 106
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 81.0 bits (191), Expect = 4e-16
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLERIMSTITKLQG 281
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI S +++G
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEG 56
Score = 74.5 bits (175), Expect = 3e-14
Identities = 31/57 (54%), Positives = 44/57 (77%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHY 430
YY E G KYVPRA++VDL P +++ VRS +G++F P+N V G+SGAGNN ++G+Y
Sbjct: 50 YYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYY 106
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 72.1 bits (169), Expect = 2e-13
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+++E+ GK+VPRA+ VDL P +D +R+G +G +F PD + G+ A NN A+GHYT
Sbjct: 55 FFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 215
RE V I GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 70.9 bits (166), Expect = 4e-13
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = +2
Query: 248 THHVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGH 427
+++ +++E GK+VPRA+ VDL P +D VR+G + ++F P+ + G+ A NN A+GH
Sbjct: 48 SYNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGH 107
Query: 428 YT 433
YT
Sbjct: 108 YT 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 248
MREIV I GQ G QIG WE+ EHGI G D+ +E
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVE 45
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 69.3 bits (162), Expect = 1e-12
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+++E G++VPRAVMVDL P +D +R+G + +F P+ + G+ A NN A+GHYT
Sbjct: 52 FFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 69.3 bits (162), Expect = 1e-12
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+++E G++VPRAVMVDL P +D +R+G + +F P+ + G+ A NN A+GHYT
Sbjct: 51 FFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 108
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
RE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 41
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 69.3 bits (162), Expect = 1e-12
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+++E G++VPRAVMVDL P +D +R+G + +F P+ + G+ A NN A+GHYT
Sbjct: 52 FFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 69.3 bits (162), Expect = 1e-12
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+++E G++VPRAVMVDL P +D +R+G + +F P+ + G+ A NN A+GHYT
Sbjct: 52 FFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYT 109
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
MRE++ I GQ G QIG WE+ EHGI G D L
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSL 42
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 68.5 bits (160), Expect = 2e-12
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +2
Query: 254 HVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
+ +++E GK+VPRA+MVDL P +D +R+G + +F P+ + G+ A NN A+GHYT
Sbjct: 55 NTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYT 114
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDLQLE 248
RE++ I GQ G Q+G WE+ EHGI G + + L ++
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVD 50
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 66.9 bits (156), Expect = 6e-12
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
++++ G+YVPR++ VDL P +D +R+G + ++F P+ + G+ A NN A+GHYT
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 215
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 66.9 bits (156), Expect = 6e-12
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
++++ G+YVPR++ VDL P +D +R+G + ++F P+ + G+ A NN A+GHYT
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 230
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 66.9 bits (156), Expect = 6e-12
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
++++ G+YVPR++ VDL P +D +R+G + ++F P+ + G+ A NN A+GHYT
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGD 230
MRE++ I GQ G QIG WE+ EHGI G D
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSD 39
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 66.9 bits (156), Expect = 6e-12
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
++++ G+YVPR++ VDL P +D +R+G + ++F P+ + G+ A NN A+GHYT
Sbjct: 50 FFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 215
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.5 bits (155), Expect = 8e-12
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
++++ G+YVPR++ VDL P +D +R+G + ++F P+ + G+ A NN A+GHYT
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 215
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.5 bits (155), Expect = 8e-12
Identities = 23/58 (39%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
++++ G+YVPR++ VDL P +D +R+G + ++F P+ + G+ A NN A+GHYT
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYT 107
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDATG 215
MRE++ I GQ G QIG WE+ EHGI G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 62.9 bits (146), Expect = 1e-10
Identities = 22/58 (37%), Positives = 40/58 (68%)
Frame = +2
Query: 260 YYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGHYT 433
++++ G++VPR++ VDL P +D +R+G + ++F P+ + G+ A NN A+GHYT
Sbjct: 49 FFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYT 106
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 114 MREIVHIQAGQCGNQIGAKFWEVISDEHGI 203
MRE++ I GQ G QIG WE+ EHGI
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGI 30
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 61.3 bits (142), Expect = 3e-10
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +2
Query: 248 THHVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGH 427
T + ++ E +GGK+VPR + VDL P +D VR+G + +F P+ + G+ A N A+G
Sbjct: 54 TINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGR 113
Query: 428 YT 433
YT
Sbjct: 114 YT 115
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 117 REIVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDS--DLQLERIMSTITKLQG 281
RE++ I GQ G QIG WE+ EHGI G + D D + E I + + G
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAG 64
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 61.3 bits (142), Expect = 3e-10
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +2
Query: 248 THHVYYNEASGGKYVPRAVMVDLXPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNLAKGH 427
T + ++ E +GGK+VPR + VDL P +D VR+G + +F P+ + G+ A N A+G
Sbjct: 26 TINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGR 85
Query: 428 YT 433
YT
Sbjct: 86 YT 87
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 263 YNEASGGKYVPRAVMVDLXPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNLAKGH 427
+ +A YVPRAV+VDL P ++ + P F +F DN GAGNN A G+
Sbjct: 53 FYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 123 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 263 YNEASGGKYVPRAVMVDLXPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNLAKGH 427
+ +A YVPRAV+VDL P ++ + P F +F DN GAGNN A G+
Sbjct: 53 FYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 123 IVHIQAGQCGNQIGAKFWEVISDEHGIDATGAYSGDSDL 239
++ + GQCGNQ+ FW+ + DEHGI+ G + + D+
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM 45
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 70 YLIFDSGGSKFLVQS*GKSSTSRRVNAGIRSEQSSGK*SRTSTALTPRVLTAATPTCSL 246
Y I D SK+++Q ++ + +R + S +TP VL A T C++
Sbjct: 64 YRILDQNESKYILQQQSAAAIEEKKGTLLRRKSSKKLIEPLPMIITPPVLMARTQCCAV 122
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 419 SPSYSPPQTVRRRSCPVGRFAQTARNGRSP 330
SPS SP Q RRR P G +++ R RSP
Sbjct: 456 SPSKSP-QAPRRRRSPSGSKSRSPRRRRSP 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,594,062
Number of Sequences: 27780
Number of extensions: 216800
Number of successful extensions: 622
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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