Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0077
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q554N7 Cluster: EGF-like domain-containing protein; n=2...    34   1.6  
UniRef50_A1KAM4 Cluster: Conserved hypothetical secreted protein...    32   5.0  
UniRef50_Q89K70 Cluster: Bll5041 protein; n=2; Bradyrhizobiaceae...    31   8.8  
UniRef50_Q4WV56 Cluster: SNF2 family helicase, putative; n=3; Tr...    31   8.8  

>UniRef50_Q554N7 Cluster: EGF-like domain-containing protein; n=2;
            Dictyostelium discoideum|Rep: EGF-like domain-containing
            protein - Dictyostelium discoideum AX4
          Length = 1918

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 111  GDSFQFCK-MTSCCTCEGHHSGAXSSLPLV 197
            G SF  C   T  CTC+G   GA  SLPL+
Sbjct: 1256 GSSFGSCNNQTGVCTCDGSQQGADCSLPLI 1285


>UniRef50_A1KAM4 Cluster: Conserved hypothetical secreted protein;
           n=1; Azoarcus sp. BH72|Rep: Conserved hypothetical
           secreted protein - Azoarcus sp. (strain BH72)
          Length = 496

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 212 RWSIFGSQXKAPACTAGP 265
           RWSIFG Q KA A T+GP
Sbjct: 260 RWSIFGEQSKAEAVTSGP 277


>UniRef50_Q89K70 Cluster: Bll5041 protein; n=2;
           Bradyrhizobiaceae|Rep: Bll5041 protein - Bradyrhizobium
           japonicum
          Length = 603

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +2

Query: 200 PGSSRWSIFGSQXKAPACTAGPTTQNDFQLLD 295
           PG + WS+FG+   AP   A PT Q++ QLLD
Sbjct: 85  PGGAMWSLFGAMV-APG-VAVPTAQHEQQLLD 114


>UniRef50_Q4WV56 Cluster: SNF2 family helicase, putative; n=3;
           Trichocomaceae|Rep: SNF2 family helicase, putative -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 1167

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 322 LKVFPDVLXVEQLEIILSCGPSCAGRGFXLASEDAPSRGTRQTSGRLXLA 173
           L+ FPD+   E L   L   P   GR   + S + PS+G R+   R+  A
Sbjct: 234 LETFPDLFDDELLNSSLESLPGDTGRRSDMPSANRPSKGPRKQKNRVSAA 283


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,630,064
Number of Sequences: 1657284
Number of extensions: 7020113
Number of successful extensions: 15971
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15960
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)